Helicoverpa zea (corn earworm): 124643764
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Entry
124643764 CDS
T08400
Name
(RefSeq) uncharacterized protein LOC124643764 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124643764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124643764
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124643764
mRNA degradation factors
5'-3' decay
Decapping complex
124643764
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
DUF1664
Motif
Other DBs
NCBI-GeneID:
124643764
NCBI-ProteinID:
XP_047038793
LinkDB
All DBs
Position
28:4696937..4726797
Genome browser
AA seq
1052 aa
AA seq
DB search
MADSFFGFDTSLSNLNDDEGGGEPSEDEYDALNDETFGQGSDEFDWEVEHEQLAEQLESS
RRHNSGIDDLANTQLGEISIVVPRSFTRGTMKLHTVSEASLSQLVLDETDAPHSRSFSSN
VWRHDPIFPSAPTPVQGLKNVCTVEELERQLRQKQVPQPNFNQNYFQPRFPPVILQRPPG
LQAPVPLPFAPQQSMSHNMNQPLTKLMNQMGQNNQLLPNHVNQMGQNVTQFMNNQIGNQF
QNNPIGPGNNMMNQLTQNMSVHQMGQNNQMMGQNVNQMGQNLNMSQSMGQMGQSMNQMGQ
NVNQMGQNMGQNVNQMSQNMSQMGQNVNQMGQNMQSMGQNLSQMNNHMGSNQMGQNPNQM
GQNPNQMGQNVNQMMQNGNQFPGMSQFQHMMGQPRMMGPPPGINMQRPNFNSNMGQYNPN
FRPSMPSKPEQPINQPNMMINQPMLIKNQPQPINNIKHSPSNQMNHMNQINQINQSPQSK
NTPKPVPKDQKVQKSRVYNNSKQSQNLTSQNLVQLIQNTHPMLQFNNSFHNANHHPMLNN
RNNVFTNSQFSHPMFNNQRVNGTFNNRHSINGDDASGSDTDEYAGLMTAREKQWLINIQM
LQLNTGTPYIHDFYYTVFLERQASKEKEGVKEAHKANQQNHPFYSGGVKQESHTHRERHN
SNRHNSTSEDSATPRTYVPTQFENSLGKLQCGSVTAPRKIIDVEVVGGDSAPARMSRASS
VASTTHPTEVPREMKRTKQLLLDIEALYLILLRLEELNDPLAISNALILKEREEKQKQLE
AAQKEAESEQQEVSNLFLKNIESVQRRPKQDSPKSESIDKRQVVNLAVNQKPVPTKNLLD
EDKDDLINKMFAGLLHSDRVQQMLTVRKGRTLISRFVSRVPASHGRLRWLWARVLRALPH
AARRDDTACVALAKHYTDYIQTTSGWAPILESCGLLSEAFDPARTPYALTTAFTLSCVCA
LIDKASMLVNTPEATSNERQWSKFLKTLARALKNTTLTVARPVKPMSATKLTYHMKQLDS
RTTIEILQRGKTAEFADLTKTEVAEQLIKYLC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctttcttcgggttcgatacttcgttatcgaacttaaatgatgacgaaggt
ggtggtgaaccatccgaggacgagtatgacgctctcaacgatgagacctttggccaaggt
tctgacgagttcgactgggaggtggagcacgagcagctcgccgaacagctggagagcagc
cgcagacacaacagcgggatcgacgacctcgctaacacacagctgggtgagatatctata
gttgttccccgcagtttcacccgagggacgatgaaactacataccgtatcggaggcgtcg
ttatcacagctagtgttggacgagacggatgcaccacactcgaggtctttctcctcaaat
gtgtggaggcatgaccccatctttccaagtgctcccacaccggtgcaaggattgaagaat
gtgtgcacggtggaagaactggaacgccaactgcggcagaagcaggtgccgcagccaaac
ttcaaccagaactactttcagccaagatttccaccagttatactacaaagacctccgggt
cttcaagcccccgtacccttaccatttgccccccaacaatcaatgtcccacaacatgaat
caaccgttaaccaagctcatgaaccaaatgggacaaaacaaccaactactacccaaccac
gtcaaccaaatgggccaaaacgtaacacagttcatgaacaaccaaattggcaaccagttt
caaaacaaccctataggcccagggaataatatgatgaaccaactcacgcaaaatatgagt
gttcaccaaatgggacaaaacaaccagatgatgggacagaatgttaaccaaatgggacag
aatttgaatatgagtcaaagtatgggtcagatgggacagagtatgaaccaaatgggacaa
aacgtcaatcaaatgggacagaatatgggacaaaatgtcaatcagatgtctcagaatatg
agtcagatgggacagaacgtcaaccagatgggacaaaacatgcagtcgatgggtcaaaat
cttagccagatgaacaaccatatgggtagtaaccagatgggtcagaatcccaaccagatg
ggtcagaatcctaatcagatgggtcagaatgttaaccagatgatgcagaatggtaaccag
tttcctggtatgagtcagtttcagcatatgatgggtcaacctaggatgatggggcctcct
cccggtattaatatgcagaggccaaattttaattctaatatgggccagtataatcctaat
tttcgtccctcaatgccatcaaaaccagagcaaccaataaaccaaccgaacatgatgatc
aaccaaccaatgctgataaaaaaccaaccgcaaccaattaacaacatcaaacactcaccc
agcaaccaaatgaaccatatgaaccagattaaccaaatcaaccagtcgccacagagtaaa
aatactccgaaaccggttccgaaagaccagaaagtccaaaaaagtcgggtgtataataat
tcgaagcaaagtcagaatttgacttcgcaaaatttggtccagttgatacaaaatacacat
cctatgttgcaatttaataatagttttcataacgccaatcatcatccgatgttgaataat
agaaataatgtatttactaacagccagtttagccatcctatgttcaataatcagagggtg
aatggtacttttaataataggcattcaataaacggtgatgacgcaagcggaagtgacacg
gacgaatatgcgggtctcatgaccgccagagagaaacagtggctcattaatatacagatg
ttacagcttaacactgggactccttatatacacgacttttactatacggtgttcttagag
cgacaagccagcaaagagaaggaaggcgtcaaagaggcgcataaggcaaaccaacagaat
catccattctatagcggaggagtgaaacaagaatcccacacccacagagaacgtcacaac
tcgaacaggcacaactcgaccagcgaggacagcgccactcctcggacatacgtgcccacg
cagttcgagaactcgctcggcaagttacagtgcggcagcgtgacggcgccgcgtaagatc
atcgacgtggaggtggtgggcggcgactccgctccggcacggatgtccagagcgtctagc
gtcgccagcactacgcatcctactgaggttcccagagaaatgaagagaacaaaacaactc
ctgctcgacatagaagcgctatacctgatactgctgcggcttgaagaactcaacgacccg
ctcgcgatatccaacgcgcttatacttaaggaaagagaagaaaaacaaaaacaattggag
gcggcacaaaaagaggcggagagtgaacagcaagaggtctccaacttgttcctcaagaat
atcgagtcggtgcagcggaggcctaagcaggacagccctaagagcgagagcattgataaa
agacaggtggtgaacctcgcagtgaaccagaaaccggttcccaccaagaatctcctggat
gaagacaaggatgacctcataaacaagatgtttgccggcctactgcacagtgaccgggtg
caacagatgctcactgttaggaagggacggacgttaatatctcgtttcgtatcccgcgtg
ccggcgtcgcacgggcgcctgcgctggctgtgggcgcgggtgctgcgtgccctgcctcac
gcggcgcggcgcgacgacaccgcctgcgtggcgctcgccaagcattatactgactacata
caaacgacatctggctgggcgccgatactggagtcgtgcggtctgctgtcggaagccttc
gaccccgccaggacgccctatgcgttaactacagctttcaccctaagctgcgtgtgcgcg
ctaatagacaaggcatcgatgctggtcaacactcccgaagcgacttccaacgaacggcaa
tggtcgaaattcctcaaaacactcgctcgagccctcaaaaacacgaccttaacagtcgca
agacccgtaaaacctatgtccgcaacgaaactaacttatcatatgaaacaactggattct
aggaccacaatagaaatattgcaaaggggcaaaactgcagaattcgcggacttaaccaaa
accgaagttgctgaacaacttatcaagtacttgtgttga
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