Helicoverpa zea (corn earworm): 124644029
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Entry
124644029 CDS
T08400
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124644029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124644029
Spliceosome [BR:
hze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124644029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
124644029
NCBI-ProteinID:
XP_047039161
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Position
29:complement(3249095..3275836)
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AA seq
697 aa
AA seq
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MALQLSRREVEDLRSSLDRAIYRTIGKSDSSLLSTVSSCLSSGYERRKIIDKISAHIDSK
KASKLADKVIALAQELISSSKSQKRKHDSGDRDKEVKRSRHDDEKESKDDRKEEKKNGVD
VPSVLPEGETVGSKMAVLSADRIKLMMANAQKEIEERKRALLAMKGDKSGVSAAAAAAQQ
LKVQVQQTSSIAPPSVIKPVLYSKPVGNALSQEELEKQRKIAELQARIQRKLAGGALSST
AGSGPAPLILDREGRTVDTSGKRVQLTHVAPTLKANIRALRREEFRAQLSDTGAPDAAAR
WHDARVPLRPHARLRRPLRFHEPGRFVQLAERLRMKAQLEKLQNEISQIARKTGISSATK
LALLAADTPDSDRVPDIEWWDSVILMTPEEREHKRQTSDATSEQSDTSDARTHSQRVDAC
HVGEDNIVDNLNEAAITNLVEHPQQLRPPTEPLKPTYMPVFLTKKERKKLRRQSRREAWK
EEQEKVRLGLEAPPEPKLRISNLMRALGTEAVQDPTAIEAKVREQIAKRQKTHLEANKAR
ALTKDQKREKVDRKIREDTSMGVHVAVYRVKDLFECASAKFKVEANACQLHMTGTVALHR
GCCVVVVEGGPKQHNKYKRLMLHRIKWEEDIVKDADGSEVPNSCALVWEGTVKQRAFGDI
KFKVFAIEKQARAHFQSHRVEQYWDLAYSGAVLSNAD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctttacagctttctaggcgggaggttgaggaccttaggtcttccctcgaccgcgca
atatacaggactatcggaaaatccgatagttcgctgctatctaccgtttcatcatgtctc
tctagtggctatgaacgcagaaaaataatcgacaagatatcggctcacatcgattcaaag
aaagcaagtaaactcgcagacaaagtcatcgctttagcccaagagctgatctccagctcc
aagtctcaaaaacgcaagcatgactctggtgacagagacaaggaggtgaagcgttcccgc
catgatgatgagaaggagtcgaaagatgataggaaagaagagaagaagaatggagttgat
gtgccctctgtgctgcctgagggggagacggtggggtctaagatggctgtgctgagtgct
gatcggattaagctaatgatggccaacgcccaaaaagagatcgaagaacgcaaacgtgcc
ctcctagccatgaaaggagacaagagtggagtgagtgcagccgctgcagcagcccaacag
ttgaaggtccaagtgcagcagaccagctccattgcaccgcccagcgtcattaaacctgtg
ctgtattctaagcctgttgggaacgctctcagtcaggaagagttggagaagcagaggaag
atagctgaactgcaggccaggatacagaggaaattggctggtggcgcgttgagcagcaca
gcaggcagtggtcccgcccccctcatcctggaccgagaaggtcgcaccgtggacaccagc
ggcaagagagtgcagctcactcatgttgctcctaccttgaaggcgaacatccgcgccctc
cgccgcgaggagttccgcgcgcagctgtcggacaccggcgcgcccgacgccgccgcgcgc
tggcacgacgcgcgcgtgccgctccgcccccacgcccgtctgcgccgccccctgcgcttc
cacgagcccggccgcttcgtgcagctcgcggagcggctcaggatgaaggctcaactggag
aagctacaaaacgagatatcccaaatagctcgcaagactggtatctcgtcggcgactaag
ctcgctcttctcgccgctgacacgcccgactctgatagagtgcctgatatcgagtggtgg
gacagcgtgatcctaatgacgcccgaagaacgcgaacacaaacgtcagacgtcagacgcg
acatcagaacagtctgacacgtcagacgcgcggacacactcgcagagagtggatgcctgt
catgtgggggaggataatattgtggacaatttaaatgaagccgctattactaacttggtt
gaacatccacagcagttgaggcctccgacggaacctctaaaaccgacatacatgccagtg
tttctgacaaagaaagaaagaaagaaactccgccgtcaaagccgtcgggaggcatggaaa
gaggagcaggagaaagtcagactcgggttagaagcacctccggagcctaaactaaggata
tccaatttaatgagggctctaggtaccgaagcggtgcaagacccgaccgctatcgaggcg
aaagttcgagagcaaatagcgaagcgacagaaaacgcatctcgaagccaacaaagcgaga
gctctcactaaagaccagaaaagagaaaaggtggataggaaaataagagaagatacatct
atgggagtacatgtcgctgtttacagagtgaaagacctattcgagtgtgcatcagcgaag
ttcaaggtggaagccaacgcctgtcagctgcacatgacgggcaccgtggcgctgcaccgc
ggctgctgcgtcgtggtcgtcgagggaggccccaagcagcacaacaagtataagagactg
atgctacaccgcatcaagtgggaagaagacattgtgaaggacgcggacggcagcgaggtg
cccaactcctgcgccctcgtctgggagggcaccgtcaagcagagggccttcggagacatc
aagtttaaggtattcgcgatcgagaagcaagctcgagcacatttccagtcccatcgcgta
gaacaatactgggacttagcctatagcggcgccgttctcagcaatgccgactaa
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