Helicoverpa zea (corn earworm): 124644507
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Entry
124644507 CDS
T08400
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124644507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124644507
03036 Chromosome and associated proteins [BR:
hze03036
]
124644507
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124644507
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124644507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Nucleoporin_FG
TPR_Sec16
Motif
Other DBs
NCBI-GeneID:
124644507
NCBI-ProteinID:
XP_047039884
LinkDB
All DBs
Position
30:complement(5411984..5477846)
Genome browser
AA seq
1852 aa
AA seq
DB search
MFQKPAFGSNTTNFGSFNAGTSTASPFGGFKPATGTSAFGAPPAFGAATSTQQTTGGGLF
GSTNTTGGLFGGSTASTSTAGFGASTSGFGFGAPQPASGGLFGNTSTVGGGLFGNQHNQT
AFGAKPTGFGFGSTSTTGAASGSLFGSTPATGTGLFGQQNNTIGGGLFSNNTAGAFGQQQ
QQATGTAHVKYNPVVGTDVVVKSGTSQNVNIKHHCITCMKEYENKSLEELRLEDYVAGRK
GSSGAVFGGFQQQTENKPLFGNTSFGQPATTSSNSVFGGSALGGGFGATAPTSSFSFAAT
PAQPATQGLFGQAKPAFGATPATGGTGLFGATTTQAPTFGTNTSTFGFGTNTQPQQQTGG
LLFGGAKPATSGFGTAPTSTGFGGFGSTGVFGAKTQAPSFGTQAPAFGSMTTGAFGTSTS
QSGGLFAGQGFGKPTTAPTFGFNNPQTGLGGGLAGLGTNTFQAKPAVPAFGQLGATMFNQ
PTQNNTFKTGLDSGLGGGMFGNNSSLGLGMTLGGMQNNTTSVMNNSLSGSSAGGNVHEQI
LTLAARPYGDSPLFKDLLPDSSTTAEDVLKPTNPAAVKAVLDSSNSAAYRVTSPTAIRLT
VTPRASSDKKSLFDGLEETDASLEDKLCLKPSRKRLVLRPNQRANEGHNDSVDHANDTGR
SLEDQPQSNGGVPAGSLAADQPNIDEVDRKQDDYVSLKNSAGRQADVSSGPDKHGSWLSA
SKMPWGDKEKSIDGDPTPRLYPNIDKDIQAQVSERRASWLTTKPLRKPLVSNPDAAENSV
RELRVRDRSHDKENVDTLSVSEEEHVSPRELPPHPTGVKLTRPGYYTIPSLDEMISYIRS
DGSCVVPHLTVGRHNYGSVHYDAEIDVSGMDLDSLVHFLNKEVIVYPEESEKPPLGSGLN
RRAVVTLDRVWPRDKSEKRPITDPDRLLKMDYENKLRRVCDKHNTKFIEYRPQTGSWVFR
VEHFSKYGLTDSDEEEDVPELMKRQLVTQTLQKAAAPTPKQPVGTASAGLGGLGGLAEDN
LFAMQQTSLNLLNGAAKAFEMDTTEDNTESQSLYLDNRAYGVKSPTSELARLENRQSHNV
QLMKASLYADTEMEDDASVSTGDQLVPVSVPLLTMPALAPSVIKDDQQISMTEAPDAEET
QMKPLIVRPHTIVLNYHRKVPPFKQTIAGRLDAAYISDMSVCRARHARVGFGPAGALAFA
TSLHSVNDLPRTAELSELGRYVRGRASNDWSEPLLVRMAIGQPEKDDAMLEVLKKQLEVL
LNYSTHIEVAEGQCPQLRVSQEPRDRRDVLRQYLRLANVNNRHKFGVSGAYCHEVWQLCD
ALWGADLENDGVPSQDLLSTVNRHRKLLDWLKSAVSEATDEELSEPMPGEKEDEADGHSA
RIWTLLLGGRILEACKVAKEHGDLNMAMLIAQAAGDPSFRSLITRQLSLWRECGADTLIS
SHRWATLQLIAGQPPRDKLAHSHWLTALHATARYLCSHVPSLEQVMRTYEGFFITGEDRD
DDEVDLTVVDDDEMGMRLPLPPYVNQYDVTVDYNGKQRRVLDLRYELLRARAFNCRPKLR
PAAYTPDPLDYSLCFLLGTWFGNPSIESITGIADQLEASGEWHLAVQALCYHPDDVARGH
LIRGVLSRHAPSKADSAAVQARLELVTRLRVPRHWLLLAQAHRAKYERLPALEAEYLVGA
GQWNAAHKVLLDELLPEAVLADDLQSIAPLLEKMNSAAERDELSGWQSGGQALHLYLHVC
VQIRGLVSSAEAQRDRANVHAQLEALRPKVAAACRALGGLQPKSLGGRFARAEMGARLVQ
CTLAAGEAAAHVAALLRTLALPPDTTHTAQHKISSMLASRAAESACPASPAS
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaaaccagcttttggttctaacacgaccaattttgggtcgttcaacgcgggt
acgtcgacggcgtctccgttcggcggcttcaagccggcgacgggtaccagcgcgtttgga
gccccgcctgccttcggggctgctacgtcaacccagcagactacgggtggaggtctattc
ggctccacaaacaccacaggaggcctgttcggtggctccacagcatccacgtctacagcg
ggcttcggtgcgagcacctcgggcttcggtttcggagccccccagcctgctagcggaggc
ctattcggaaatacttctaccgtaggcggaggactgtttgggaatcaacataatcagacc
gctttcggggctaagcctactggtttcggcttcggcagcacgagtacaactggtgccgcg
tcgggcagtctgttcggctcgacaccagccacgggtaccggactattcggacaacagaac
aacaccatcggaggtggactgttctctaataatactgcaggagcattcggtcaacagcaa
cagcaggcaactggcacagcacacgtcaagtacaaccctgtagtcggcaccgacgtggtc
gtcaagtctggcacctcgcagaatgtcaacatcaagcatcattgtattacttgtatgaag
gaatatgagaacaaatccctggaagagttacgtctagaagactatgtggctggtcggaag
ggcagcagcggagccgtgttcggtggcttccaacagcagacggagaacaagccgctattc
ggcaacacctcattcggtcaaccagcaaccacgagctccaactcagtgttcggtgggtct
gccctgggaggcggcttcggtgccacagcccccacgtcgtcgttctcgttcgcggccacc
ccggcgcagcccgccacgcaggggctgttcggacaggctaaaccggccttcggggctacg
cctgctaccggtggcacgggtttattcggtgctactactacgcaggcgcctacctttggc
acaaacacctccacattcggcttcggaactaacacacagccacagcaacaaactggcggc
ctcctattcggcggcgcgaagccggcgacttccggcttcgggacggcgccgacgagcacc
ggcttcggcggcttcggctccaccggcgtgttcggcgccaagacgcaggcgcccagcttc
gggacgcaggctcctgcattcggttcgatgacgactggggccttcggcacgagcacgtct
cagtcgggaggcctgttcgcgggacagggcttcgggaaacccaccacggcgcctacattc
ggcttcaacaatccacagactgggctgggaggcggtctggctggtttaggcacgaacacg
tttcaagcgaagccggcagtgcccgcgtttggacaactcggcgccaccatgttcaaccag
ccgacacagaacaatacttttaagactggtctagacagcggcctcggcggcggtatgttc
ggcaacaacagctcgctggggctcggcatgacgctcggcggcatgcagaacaacactact
agtgtcatgaacaacagcctctcgggttcgtcggcgggcggtaacgtgcacgaacagata
ctaactctagcggcccggccttacggcgactcgccgcttttcaaggacctactgcctgat
tcatcgacaacagccgaagatgtgctaaagcccacaaacccagcagcagtgaaggcagtg
ctagacagctccaacagtgcggcgtaccgcgtgacgtcacccaccgccatacgcctcacc
gtcaccccacgagctagcagcgataagaaatctctattcgacggtttagaagaaacagac
gcgagtctagaagacaagctttgcctgaagccgtctcgcaagcgtctcgtgctgcgcccc
aatcagagggcgaatgaaggtcataacgattctgtcgaccatgctaatgataccggcaga
tcactagaagatcagccgcaatccaacggcggtgtgccggccggcagcctagccgctgat
cagccgaacatagacgaggtggaccgcaaacaggacgactatgtctccttgaagaattct
gctggtagacaagctgatgtttcttccggccctgataaacatggaagttggctcagtgca
tctaaaatgccgtggggtgacaaggagaagtctattgatggagacccaacgccacgactc
tatcctaatattgacaaggacattcaagcccaagtatcagagcgccgagccagctggttg
accaccaaaccgctgcggaaacctctcgtgtccaaccctgatgctgcagagaactccgtc
agagaactcagggttagagaccgctcacacgacaaggagaatgtcgatactctgtccgta
tcggaagaggaacacgtttcgccgcgcgagttgccgccgcatcccactggcgtgaagctc
actcgtcccggctactacaccatacccagcctcgatgagatgatcagttacatacgtagt
gacggtagctgcgtggtgccgcacctcacggtgggccgccacaactacggcagcgtgcac
tacgacgcagagatagacgtcagcggcatggacttggatagtttggttcacttcttaaac
aaggaggtgatagtataccccgaggagtcggagaagcccccgctgggttcaggcctcaac
cgccgcgccgtggtgacgctcgaccgcgtgtggccgagagacaagagcgagaagcgaccc
atcactgatcctgacagactactaaaaatggactacgaaaacaaactacgccgcgtctgc
gataaacacaacactaagttcatagagtaccggccacagaccggcagctgggtgttccga
gtggaacacttcagcaagtacgggttaaccgactccgatgaggaggaggacgtacccgag
ctcatgaagagacagctcgttacacagacgctgcagaaggctgctgctccgactccaaaa
cagccggtaggcacagcatcagcggggctgggcgggctgggcggcctggccgaggacaac
ctgttcgcgatgcagcagacctcgctcaacctgctcaatggcgccgccaaagctttcgaa
atggacaccacggaagataatacggagtcacaaagtctttatttagataacagagcatat
ggtgtaaaaagtcctacgagtgagctggctcgcttggaaaaccgacagagccacaatgta
caacttatgaaggcgtcgctctatgctgataccgaaatggaagatgatgcttcagtatct
acgggagaccagttagtaccagtgtctgtgccgctactaactatgccggcactcgcgccg
tctgtcatcaaggacgaccagcagatatccatgactgaggcacctgatgctgaagaaact
cagatgaagccgctcatagttcgtccacatacaattgtgttgaactatcacagaaaggtg
ccgcccttcaaacagactattgccggtcgtctggacgcagcctacatatccgacatgtcg
gtgtgtcgggcccgacacgcccgcgtgggcttcggtccggcgggggcgctcgccttcgcc
acctccctgcactcggttaacgatttacctagaacggcagaactatcagaattgggtagg
tatgtccgtggcagagcttctaacgactggtcagaacctctgctcgtcagaatggctatt
ggacaacctgagaaagatgatgctatgttggaagtcttaaagaagcaactagaggtactt
ctcaactactcaacgcatatagaggtagcagaaggtcaatgcccgcagctgcgcgtgtcg
caagaaccgcgcgaccgacgcgacgtgctgcgacagtacttgcgactcgctaatgttaac
aacaggcataagttcggcgtgtcaggcgcatattgtcacgaagtgtggcaactatgtgac
gctttgtggggagctgatcttgaaaacgatggtgtaccgagccaagacctcctatccaca
gtgaacaggcaccggaagctgctggactggctcaagagtgccgtctccgaggccacggat
gaggaactgtctgaacccatgcccggggagaaggaggatgaagcggacgggcacagcgct
cgaatttggacactactactgggcgggcgaatcctggaagcgtgtaaagtggccaaagaa
cacggcgacctcaacatggccatgctcatcgctcaggctgctggcgacccatcattccgt
tccctcattactcgtcaactgtccctctggcgagaatgtggtgccgatactctcatatct
tcccaccgctgggcaacactgcagctcatcgctggacaaccgcccagagacaagctggcc
cactcgcactggctcactgccctacacgctactgctaggtacctatgctcccacgtaccc
tcactggaacaagtgatgagaacgtacgaaggcttcttcatcaccggtgaggatcgagat
gatgatgaagtggatctgactgtcgtggacgatgatgagatgggcatgcggcttcctctg
ccgccgtacgttaaccagtacgatgttactgttgactataacggcaagcaacgtcgcgtt
ctagacctccgctacgagttgctgcgagctcgtgccttcaactgcagacccaagctgaga
cctgctgcttacactcccgatccgttagactatagcttgtgtttcctgctaggcacgtgg
tttggcaacccctcgatagagagtataacgggcatcgctgatcaactagaagcgagtggg
gagtggcacctagccgtgcaggctctctgctatcaccccgacgatgtggctcgaggccac
ctcatccgcggcgtcctgtcccgtcacgcgccgagcaaggcggacagcgccgccgtgcag
gcgcggctcgagctcgtcacgcggctgcgagtgccgcgccactggctgctgctggctcaa
gcgcatagagctaagtatgagcgtctgcccgcgttagaagcggagtacctggtcggtgct
ggtcagtggaacgcggcgcataaagtgttgctcgacgagctgttacccgaagctgtgtta
gcagatgacctacagagtatagcacctttactagagaaaatgaatagtgccgcagaacgg
gacgaactcagcggctggcagagtggcggacaagcgctgcatctgtatctacacgtctgt
gtgcagatacgcggtctagtatcgtcggcagaagcccagcgtgaccgcgccaacgttcac
gcgcagctcgaagcgttgcggcccaaagtcgccgccgcttgccgggcgctaggcggcctg
cagcccaagagtctagggggtcgcttcgctcgtgccgagatgggggcccggctggtgcag
tgcacgctggcggccggggaagccgccgcgcatgtcgccgcgctgctgaggacgctcgcc
ctcccgcccgacaccacgcacactgcacagcacaagattagctcaatgttggcgtctcgt
gcggccgagagcgcttgtcctgcgtcgccagccagctaa
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