Helicoverpa zea (corn earworm): 124644673
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Entry
124644673 CDS
T08400
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124644673
03041 Spliceosome [BR:
hze03041
]
124644673
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124644673
Spliceosome [BR:
hze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124644673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
124644673
NCBI-ProteinID:
XP_047040132
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All DBs
Position
30:complement(4850066..4906051)
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AA seq
409 aa
AA seq
DB search
MLTMSTLMMPAATMTTMTNAGPIPVAAATKLEPKLLQLPHPALVPQMAQQPQPQPHHHQH
PHSNNKVGWEDMRRSGHAWNQHGLSVQEHYHIFVGDLSPEIETQSLRDAFAPFGEISDCR
VVRDPQTLKSKGYGFVSFLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK
PLTFDEVYNQSSPTNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFST
KESATHAIVAVHNTDVNGQPVKCSWGKESGDPNNAQAQGQIPTAYSPFGATYTGGVPPTS
YWYNTYPQQLGGFLQGVQGVQGYTYAGQAFAGYQQQYMGKEFQWANTTACSSMGGVQLPW
ALGAGVGGVGSVGGVAAMSQPPQVLHYPVQHFQVQPIGEDEWLAPSLLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgatgtctactcttatgatgccagcggctactatgacgactatgactaacgcc
ggtcccatacctgtggctgctgctacgaagttagaaccgaagttgttgcaactcccacac
ccagcgctggtgccgcaaatggcccaacagccacagccacagcctcatcaccaccagcat
ccccatagtaataacaaagttggatgggaggatatgcgtcgatccggccatgcatggaat
cagcatggattatcagtccaagaacattatcacattttcgtgggagacctgagtcccgag
atcgagacgcagagcctccgagatgccttcgcgcctttcggagaaatatctgactgtcgc
gtggttcgcgatcctcagacgctgaaatccaaaggctatggattcgtctcgtttttgaaa
aaatcggaggcggaatcggctataacttcaatgaatggacagtggctgggctcccggtca
atccgcaccaactgggcgactaggaaaccaccagcgcccaagaatgagttaaactcaaaa
ccgctgaccttcgacgaggtctacaaccagagctctccgacgaactgcacggtctactgc
ggcggtctcactaccggcctgacggaggagctcatgcagaagaccttccaaccgttcggg
actatccaggagatacgcgtgttcaaggataagggctatgcttttattagattctccacc
aaggagtcggcaacccacgcgatcgttgctgtccacaatacggacgtgaacggccagccc
gtcaagtgttcctggggcaaggaatcaggggatcccaataacgcacaggctcaaggacag
atcccaacagcctacagtcctttcggcgcgacctacaccgggggtgttcccccaacctcc
tattggtacaacacctaccctcaacagctggggggcttcctccaaggagtccagggggtg
caaggatacacgtacgccggtcaggccttcgctggctatcagcagcagtatatgggtaag
gagttccagtgggctaacacaactgcatgttccagtatggggggtgtccagctaccctgg
gctctaggcgcgggggtcggaggcgtgggttctgtggggggggtcgctgctatgtctcaa
ccccctcaggtgcttcactatccggtgcagcatttccaagtgcagcctattggtgaagac
gagtggctggctccgagcctcctggtgtga
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