Helicoverpa zea (corn earworm): 124646200
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Entry
124646200 CDS
T08400
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124646200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124646200
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124646200
mRNA degradation factors
5'-3' decay
Decapping complex
124646200
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WD40_WDHD1_1st
DUF4085
WD40_CDC20-Fz
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
124646200
NCBI-ProteinID:
XP_047042252
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Position
3:1071155..1092947
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AA seq
1131 aa
AA seq
DB search
MAPTTMLPKLSDATQTISFSDGDGVCSAEVYSTNVMVNTNAGNHDHGSSKVKLKNLVDYN
WEPKFYAGQLLAIHTNGKYLAYSIKAPNAVNPGTWSGMVRVVYNPEPGTDRRALIKGMKG
EVQDLAFAHIQSQVVLACIDEQGNFYVHEIEVTDSGLRCTLLAEVREDTGAMGSSHRVVW
CPYIPDDDDEATDDDVARLLLTTHDNIARMWNTRALQAAGAGSGGAVGAAGGGALCAAEH
VGAILDAAFSPDGSALATASADGYVMFFQVYMHADSSPRCLHKWQPHGGKPLSCLFFLDN
HKNYNTDVQFWKFAVTGAENNTTIKIWSCKSWTCLQTINFTPGVGTEMTLGLKAMLDTSA
SYLLLSDFKSRSLYVLNMARDPEDSMAYCKSISEFLLPYPVLSFCIVDAEEQQTKCEPSC
DEPLYRNGSGGDADSPIHYELHHDDSGSGGSRSEEWRRVVVRLYIVQPKGLQEGRLVYEP
PRPPLHAELLHGLSELALEDSSVESAPATIASSILQQQSQQLKNLLMRSQVPDATQPGSL
IGTRPESPSIAPQLNLMTPDAFSSPGKREEDDPPLSATPDVSSKPRNSTGGPLVEETLGE
TASKLASAGSSPSREVQQIMSHSDHAFFKEEAEEVTVATETLSTTETLFEADVFAPPEAA
PLPPHPPHPPHPHKLASTNSDTWPSISVPQVSEPVPTQQLSQSLGTLACAGADDTRAAGL
SPADRTRLDALEHKLDKLTEMMSAQTRELRSLRGAVASPRDMIDEALHAHAQRTARAVES
ALADGWERISRVGEAASARAAQAAGVGAARALEPLAAALQHELANKMAATDQLLRENIDK
LATSKTVMERLSTSIAKSLSDMVRESFREALFDSVVPVMEKTHAQIFKQINQAFQNGTKE
FAANTEAAARAAAERGGAAASASLRAALERHADALAAAHGAAHHQHLADVIRDTAHSVLE
KELCWWREQARSAALASRAHSPSTPHSHHAADRQMQVAQIQSLIASGDVNGAFQQALSAS
DLALVMCACRAAEPSHVFGPPCKLKQHVLLSLVQQLAADMGRDTPLKHRYLEEAVMNLDT
TNPVTREHLPAVVRELQKQLMAFLSATPNHALARQLRMLLMATEALVKAAA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaacaacaatgcttccaaagctatcggatgccactcaaactatatcgttctcc
gacggagatggtgtatgcagtgcggaggtgtactccacgaacgtgatggtgaacaccaac
gccggcaaccatgaccacggcagctccaaggttaagctgaaaaacctggtggattacaac
tgggagcccaaattttatgcgggccagctgctggctatacataccaatgggaaatacctc
gcgtattctattaaagctccgaacgccgtgaaccctggcacatggagtggtatggtacgc
gtggtgtacaacccagagcccgggactgaccggcgagctctcatcaaggggatgaagggg
gaggtgcaagacttggcgtttgcccacatccaaagccaggtggtgctagcctgtattgac
gagcagggcaacttctatgtgcatgagattgaagtcactgacagcggactcagatgcacg
ctcctagcggaggtccgcgaagacacaggcgctatggggtcttcccaccgcgtggtgtgg
tgtccttatataccggatgatgatgatgaagccactgacgacgatgtcgctcgactgctg
ctcaccacacatgataatattgcccgcatgtggaacactcgcgccctacaagcggcgggc
gcggggtcgggcggcgcggtgggagccgcggggggcggagccctatgtgccgcggagcac
gtgggcgccatcctagacgccgccttctcgcccgacggcagcgccctcgctacagcctcc
gctgatggatatgttatgttcttccaggtatatatgcacgcggactccagcccgcgctgc
ctgcacaagtggcagcctcacggcgggaagccgctcagctgtctcttcttcctcgacaac
cacaagaactataatactgacgtccaattctggaaattcgccgtaaccggagctgaaaac
aacacaaccattaaaatctggtcctgcaagtcctggacctgtcttcaaaccatcaacttc
acccccggagtgggtacggagatgaccctcggcctgaaggccatgctggacaccagtgcc
agctacctgctgctgtcagacttcaaatccaggagtttgtatgtactgaacatggcgagg
gaccctgaagacagtatggcatattgtaagagcatatctgagttcctgctgccttatccg
gtgttgagtttctgtattgttgatgcggaggagcaacaaactaaatgcgagccgagctgc
gacgagccgttataccgcaacggctcgggcggcgacgccgactcgcccatacactatgaa
ttacatcatgatgactcagggtcgggcgggtcccgcagcgaggagtggcggcgcgtggtg
gtgcggctgtacatcgtgcagcccaagggcctgcaggagggccgcctcgtctacgagccg
ccgcgaccgcccctgcatgccgagctgctgcacggtctatcagaactggcactagaagac
agttcagtggagtcagctcccgccaccatagcgtccagtattcttcaacagcagagccag
cagctcaagaacttgctcatgcgctcgcaggtacccgatgctacgcagccaggcagctta
atcggtacccgacctgaatctccgtccatcgcgccgcaactgaatcttatgaccccagat
gctttcagctctccaggtaaaagagaggaagatgatccgccactgtctgccacgccggat
gttagcagcaaacccaggaactctactggaggaccattggttgaagaaaccttgggcgag
acagccagcaaactagcatcagccgggtccagccccagccgcgaggtgcagcagatcatg
tcacacagtgaccatgctttcttcaaggaggaggcagaagaagtgacagtggcgacggaa
actctctcaacaacagagacgttgttcgaggcggacgtgttcgcgccgcccgaggccgcc
ccgctgccgccccacccgccccacccgccgcatccccacaagctggctagcacgaatagc
gacacatggccctcaatctcggtccctcaagtatcagaaccagtccctacacagcagctg
agccaatccctcggcacgttagcctgcgccggcgcagacgacacccgcgccgccggcctg
tcgcccgccgaccggactagacttgatgctttggagcataagcttgataagttgactgaa
atgatgtcggcacaaacccgcgagctgcgcagcttgcgcggcgcggtggcgtcgccgcgc
gacatgatcgacgaggcgctacatgcgcacgcgcagcgcactgcccgggccgtcgagagt
gcgctcgctgatggctgggagcgtatatcccgtgtaggcgaggcagctagtgcccgcgca
gcccaagcagccggcgtcggcgccgctagagcattggaacccctagccgctgctctacag
catgaattagctaacaagatggccgccaccgaccagctgctgagagagaatattgacaag
ctcgccactagcaagacggtaatggagcggctaagcacgtcgatagcgaagtcgctgtcg
gacatggtgcgcgagtcgttccgcgaggcgctgttcgacagcgtggtgcccgtcatggag
aagacgcacgcgcagatcttcaagcagatcaaccaggctttccagaacgggaccaaggag
ttcgcagcgaacaccgaggcggcggcccgcgcagcggccgagcgcggcggggcggccgcc
agcgccagcctgcgcgccgcgctcgagcgccacgccgacgcgctggccgccgcgcacggc
gccgcgcaccaccagcacctcgccgacgtcatccgggacactgcgcacagcgtcctggag
aaggagttgtgctggtggcgcgagcaggcgcggtcggcggcgctggcgtcgcgggcccac
tcgccctccacgccgcactcgcaccatgccgccgacagacagatgcaagtagcccagatc
caatctctaatcgcgagtggtgacgtgaacggagcattccaacaggcgctctcagcatca
gacctggcgctggtcatgtgtgcctgcagggctgctgaaccctcgcacgtgttcgggcct
ccttgcaagctgaagcagcatgtcttgttgtctctggtacagcagctagccgccgatatg
ggtagagatacgcctcttaaacatagatacctagaagaagccgtaatgaacttagacacc
accaacccagtaacacgggagcaccttcccgcagtggtgcgagagctacagaagcagtta
atggccttcctctccgcgacgcccaaccatgcgctcgcgaggcagctgcgcatgctgctc
atggcgactgaggcactggtcaaggcggccgcctga
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