Idiomarina abyssalis: K5X84_00055
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Entry
K5X84_00055 CDS
T07548
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00071
Fatty acid degradation
iab00280
Valine, leucine and isoleucine degradation
iab00310
Lysine degradation
iab00362
Benzoate degradation
iab00380
Tryptophan metabolism
iab00410
beta-Alanine metabolism
iab00640
Propanoate metabolism
iab00650
Butanoate metabolism
iab00907
Pinene, camphor and geraniol degradation
iab00930
Caprolactam degradation
iab01100
Metabolic pathways
iab01110
Biosynthesis of secondary metabolites
iab01120
Microbial metabolism in diverse environments
iab01200
Carbon metabolism
iab01212
Fatty acid metabolism
Module
iab_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K5X84_00055 (fadB)
00650 Butanoate metabolism
K5X84_00055 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K5X84_00055 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K5X84_00055 (fadB)
00310 Lysine degradation
K5X84_00055 (fadB)
00380 Tryptophan metabolism
K5X84_00055 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K5X84_00055 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K5X84_00055 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K5X84_00055 (fadB)
00930 Caprolactam degradation
K5X84_00055 (fadB)
Enzymes [BR:
iab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K5X84_00055 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K5X84_00055 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K5X84_00055 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K5X84_00055 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QZN90957
LinkDB
All DBs
Position
complement(12006..14162)
Genome browser
AA seq
718 aa
AA seq
DB search
MIYQGESIRVDFIEPGFAELQFDAKGSVNKFDQATLEEFSEALTKLQNTDDLRGVIVTSS
KSTFIVGADITEFLTLFSDQEKTRSWVAKASRVFDQLEDLPVPTVGAVKGFALGGGCEAL
LACDYRVADTTATIGLPEVKLGLIPGFGGTMRLPRVIGPDNALEWITTGKNNKALDALSV
GAVDAVVEPENLTKAALNLAKAAAAGEQDWKAKRQPKLEPLKANDTELMMTLVTAKGLIA
AKAGKHYPAPHKALEAIENGAREHREGALKAENNAFFDLTQTEACQAQVGIFLADQAVKS
KSKKYAKAATKEIKTAGVLGAGIMGGGIAYQSALKGVPAVMKDIKQDALDLGMKEAGKIL
KKGVERGKVNNEKMIKILSSITPTLLNDAVKDVDIVVEAVVENPKVKGSVLAEIEGVISD
DAILTSNTSTISITELAKNLKRPEKFCGMHFFNPVHKMPLVEIIRGEKTSDDTVNAVVAY
ALKLGKTPIVVNDCPGFLVNRVLFPYLAGFAGMVDEGVDFVGIDKVMEKQFGWPMGPAYL
SDVVGIDTADHCTVVMEAGFPTRMKRDESSAIAKLAAAERYGQKNGKGFYVYGTDKKGKP
TKEADPATYELLGCEQGKKLDADEVIARCMIPMVNEVVRCLEEDIVGSAAEADMALLYGL
GFPPFRGGPFRYLETLGMDNFIQLADKYAHLGEIYQVTDGMREMAKAGKSYFDTTSAK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggtgaaagcattcgggtcgattttatcgaaccaggtttcgcagaatta
caatttgatgcgaaaggctcggttaataaattcgaccaggcaacattagaagaattcagt
gaagcactgacaaaattacaaaacactgacgatttacgtggcgttattgttaccagcagc
aagtcgacctttattgtaggcgctgacattactgagttcctgacactattctctgatcag
gaaaaaacccgcagctgggtagcaaaagcatcacgcgtatttgaccaactggaagacctg
ccggtacccaccgttggtgcggttaaaggcttcgcgttaggcggcggctgtgaggcacta
ttagcctgtgactaccgtgtagcggataccacagcaactatcggcctgcctgaagttaag
ctgggtctcatcccgggctttggcggtaccatgcgtttaccacgcgttattggtccggac
aacgctttagagtggatcaccacaggtaaaaacaataaagcacttgatgcattgagcgtt
ggcgctgttgatgccgttgttgagccagagaacctgacaaaagcggcgttgaatttagcg
aaagctgccgctgccggagagcaagactggaaagccaagcgtcagcctaagttagagccg
ttaaaagccaacgacaccgagttgatgatgactctggttaccgctaaaggtttaattgca
gccaaagccggtaaacactacccggcaccgcacaaggcgttagaagccattgaaaacggc
gcacgcgaacaccgtgaaggcgcattaaaagctgaaaacaacgcatttttcgatctgacc
caaactgaagcgtgtcaggcacaggttggtatcttcctggcggaccaggcggttaaaagt
aagtctaagaagtacgccaaagcagcaaccaaagaaatcaaaacagcgggtgttttaggc
gcaggcattatgggcggcggtatcgcttaccagtctgcccttaaaggcgtaccggctgta
atgaaagacataaagcaagacgctttagacttgggcatgaaagaagccggcaagatcctg
aagaaaggcgtagagcgcggtaaagtcaataacgagaagatgattaaaatcttatcttct
attacacctacgctgctgaacgatgccgttaaagacgtcgatattgttgttgaagccgtt
gttgaaaacccgaaagttaaaggttcggtgcttgctgaaattgaaggcgttatcagtgat
gatgctattttaacgtcaaacacctcgaccatttctattacagagctcgctaagaacctg
aagcgccctgaaaaattctgcgggatgcacttctttaacccggtacataaaatgccgctg
gttgagattattcgtggcgagaaaacttcagatgacactgttaatgccgtagtagcctat
gcattgaaactgggcaaaacccctatcgttgttaacgactgcccgggcttcttagtgaac
cgcgtattgttcccttacctggcaggctttgccggcatggttgatgaaggcgttgatttc
gtcggcatcgacaaggttatggagaagcagttcggctggcctatgggtcctgcgtacttg
agcgacgttgtcggcatcgacacggcggatcattgtaccgttgttatggaagcaggcttc
ccgacccgcatgaaacgcgacgagtccagcgccattgctaagctggcagccgctgagcgt
tacggtcagaaaaacggtaaaggcttctatgtttacggcaccgacaaaaaaggtaagcca
accaaagaagctgatccagccacctacgagctattaggctgtgaacaaggcaaaaagctg
gacgcagacgaagtcattgctcgctgcatgatcccaatggtgaacgaagtggttcgctgt
ctggaagaagacattgtgggctctgctgccgaagcagacatggcgttgctttatggctta
ggcttccctccattccgaggcggccctttccgttatttggaaacgcttggcatggacaac
tttattcaactggcagacaagtacgcgcacctgggtgaaatttatcaggttaccgacggc
atgcgcgaaatggctaaagccggtaaatcttactttgacacaaccagcgcgaagtaa
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