Idiomarina abyssalis: K5X84_01640
Help
Entry
K5X84_01640 CDS
T07548
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
iab
Idiomarina abyssalis
Pathway
iab03030
DNA replication
iab03430
Mismatch repair
iab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5X84_01640 (ssb)
03430 Mismatch repair
K5X84_01640 (ssb)
03440 Homologous recombination
K5X84_01640 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iab03032
]
K5X84_01640 (ssb)
03400 DNA repair and recombination proteins [BR:
iab03400
]
K5X84_01640 (ssb)
03029 Mitochondrial biogenesis [BR:
iab03029
]
K5X84_01640 (ssb)
DNA replication proteins [BR:
iab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K5X84_01640 (ssb)
DNA repair and recombination proteins [BR:
iab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
K5X84_01640 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
K5X84_01640 (ssb)
Mitochondrial biogenesis [BR:
iab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
K5X84_01640 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF3127
Lyase_8_N
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QZN91250
LinkDB
All DBs
Position
328130..328690
Genome browser
AA seq
186 aa
AA seq
DB search
MASRGVNKVILIGNLGADPEVRYTQNSTAIANLSIATSETWKDKQTGEPREQTEWHRCVA
YRRLAEIAGEYLKKGSKVYVEGRLQTRKWTGQDNVERYTTEVVINEMQMLDSRGGPQGGP
QGSAPQGQGFGGSQQQSGGYGGSQPQQQQQRPAPQPAQQQNQQSQQKPAEPAPFSPDNDF
DDDIPF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgcggtgtaaataaagtcatattaattggtaacctgggagctgacccagag
gtacgttatacccaaaacagcacagcgatagccaacctgtcgattgctaccagtgaaacc
tggaaagataagcaaaccggtgaaccgcgcgaacaaactgagtggcatcgctgcgtggcg
tatcgccgcctggcagagattgcgggtgagtatctgaagaagggctcaaaagtgtatgtt
gaaggccggttgcaaactcgcaaatggacagggcaggacaatgtagagcgttacacgaca
gaagttgtgattaacgaaatgcagatgctggattctcgtggtgggcctcagggtggacca
caaggctctgcgccgcaaggtcaaggctttggtggcagtcagcagcaaagcggtggttat
ggcggcagtcagcctcaacagcaacagcagcgtccggcacctcagccagcgcagcagcaa
aatcaacagtctcaacagaaaccggcagaacctgcaccgttttcaccggacaacgacttt
gatgacgacattcccttctag
DBGET
integrated database retrieval system
