Idiomarina abyssalis: K5X84_03675
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Entry
K5X84_03675 CDS
T07548
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K5X84_03675 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
iab01007
]
K5X84_03675 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iab03016
]
K5X84_03675 (aspS)
03029 Mitochondrial biogenesis [BR:
iab03029
]
K5X84_03675 (aspS)
Enzymes [BR:
iab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
K5X84_03675 (aspS)
Amino acid related enzymes [BR:
iab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K5X84_03675 (aspS)
Transfer RNA biogenesis [BR:
iab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K5X84_03675 (aspS)
Prokaryotic type
Other AARSs
K5X84_03675 (aspS)
Mitochondrial biogenesis [BR:
iab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
K5X84_03675 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
FF
Motif
Other DBs
NCBI-ProteinID:
QZN91623
LinkDB
All DBs
Position
779769..781538
Genome browser
AA seq
589 aa
AA seq
DB search
MRTHYCGQINAELAGQEVTLCGWVNKRRDLGGLIFIDLRDREGMLQVVFDPDQKALFETA
NSLRQEFCVRLSGKVNRRPESQVNKNMATGEVELLATDLEILSRSEPLPIDFNQQVSEEA
RLRYRYLDLRRPQMNEKLQFRAKVTSAVRRFLDDSGFLDIETPMLTRATPEGARDYLVPS
RTHKGRFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMS
AEQVMQITEQMARDLFKQLLDVDLGEFPSMTWHEAMRRFGSDKPDLRNPLELVDVADVLK
DVEFKVFSGPANDEDGRVAAIRLPGQAENVSRKMIDEYTQFVSIYGAKGLAWIKVNDRSA
GRDGLQSPILKFLPDEVIEPLLERTEAQTGDVLFFGADKANVVAEALGALRLKLGKDFEL
VSNEWKPLWVVDFPMFEVADDGSLAALHHPFTAPVNVTPEELKANPAAAISNAYDMVLNG
VELGGGSVRIHENAMQQAVFEVLGIEKDEAQEKFGFLLEALKYGTPPHAGLAFGLDRLVM
LMVGATSIRDVIAFPKTTTAACVLTDAPGAANPAALQELGVKSMVEEDE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcattactgtggacaaataaatgctgaattggcgggacaagaggtcacgcta
tgtggttgggtcaataaacgccgtgacttaggcggcctaatttttattgatctgcgtgac
cgtgaagggatgctgcaggtcgttttcgacccggaccaaaaagcgttatttgagacagca
aacagcctgcgtcaggaattctgcgttcgcttaagtggtaaagttaaccgtcgcccggaa
agccaggtcaataaaaacatggctaccggcgaagtcgaactgctggcaaccgatttagaa
attctaagtcgctctgaacctctccctatcgacttcaaccagcaagtgagcgaagaagca
cgactgcgttatcgctaccttgatttacgtcgtccgcaaatgaatgaaaaattgcagttt
cgtgcgaaagtaaccagcgcggtgcgccgttttctggatgacagtggttttctggatatt
gaaacccctatgttaacgcgtgcaacgccggaaggtgcgcgagactatctggtgccaagc
cgtacccacaaaggtcgctttttcgcgttgccgcaaagccctcagctgtttaaacaactg
ctgatgatgtcgggctttgatcgttattaccaaattgttaaatgcttccgcgacgaagac
ttgcgtgctgaccgtcagcctgaattcactcaaattgatattgaaacctcgttcatgagt
gcagagcaggtcatgcaaattaccgagcagatggctcgtgatctgttcaaacaattactt
gacgtggacttgggtgaattccccagcatgacctggcatgaagccatgcgccgttttggt
agtgacaagccagacttgcgtaacccgttggagttggtggatgttgctgatgtcttaaaa
gacgttgagttcaaagtcttttctggtccggcgaatgacgaagatggccgtgttgctgcc
attcgtttaccggggcaggctgagaacgtttcacgcaaaatgattgatgaatacacacaa
tttgtcagcatttatggcgccaaaggactggcgtggattaaagtgaatgaccgcagtgca
ggccgtgacgggttacagtcgcctattcttaagttcctgccggatgaagtgattgagcca
ttactagagcgcactgaagcacaaactggtgatgttttgttctttggtgccgataaggcg
aacgttgttgctgaagctctgggtgctttacgcctgaagttaggtaaagactttgaactt
gtcagtaatgagtggaaaccgctatgggtcgttgacttcccaatgttcgaagtcgctgac
gatggcagcctggccgcgttacaccaccccttcaccgcaccggtcaatgtgactccggaa
gaattaaaagccaacccggcagccgctatttcaaatgcctatgacatggtattaaatggt
gttgagttaggtggtggttcggttcgtatccacgaaaacgctatgcagcaagcggtgttt
gaagtattaggtattgaaaaagacgaagctcaggaaaaattcggcttcctcctggaagcg
ttaaagtacggtacgccgccgcatgctggcctagcttttggtctggatcgtctggttatg
ttgatggttggcgcaacctcaattcgtgatgttatcgcttttcctaaaacaacgaccgca
gcttgtgtccttaccgatgcgccaggcgctgcaaaccctgctgcattgcaagagttgggc
gtaaaaagtatggtagaggaagacgaataa
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