Idiomarina abyssalis: K5X84_04750
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Entry
K5X84_04750 CDS
T07548
Name
(GenBank) response regulator transcription factor
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
iab
Idiomarina abyssalis
Pathway
iab02020
Two-component system
iab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K5X84_04750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K5X84_04750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
iab02022
]
K5X84_04750
Two-component system [BR:
iab02022
]
OmpR family
QseC-QseB (quorum sensing)
K5X84_04750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
Rrf2
KaiA_N
Motif
Other DBs
NCBI-ProteinID:
QZN91813
LinkDB
All DBs
Position
1010729..1011391
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AA seq
220 aa
AA seq
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MDLLLVEDDAMLGQAVELGLSERQFNVQWVRTGAAAISESQRVNYDVVVLDLGLPDLDGS
RVLSSLRKKGQVLPILVLTARDDSSETVKLLDLGADDYMIKPFDMNELAARLRALVRRQR
GYATPELSCGPISLDELNFQVLVNQQPVNLSKREFELLRAMMAAPERVHSRDKLEQIVFR
NEQQVESNALEVHVHNLRKKLGNKEWIQTIRGVGYRLACG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggatctattgttggtcgaagatgatgcaatgctcgggcaagccgttgaacttggtttg
tccgagcggcaatttaatgtgcaatgggttcgtactggtgcggcagcgattagtgagagt
cagcgagttaattatgatgtcgttgtccttgacctggggctgccggatttagatggtagt
cgcgtattgtcctccttgcgtaaaaaaggacaagtgctgccgatattagtgctgacagcg
agagacgacagctcagaaactgtgaagctgctggatcttggtgctgatgattacatgata
aagccttttgatatgaacgagcttgcagcgagactgcgcgctttagtaaggcgtcaacga
gggtatgcgacaccagagttgagttgtgggcctatcagcctggatgagttaaattttcag
gtgcttgttaatcaacagccagtgaacttgtcgaaacgtgagtttgagttattgcgtgca
atgatggctgcgccggaacgggttcatagtcgagataagttagagcaaatcgtttttcgt
aatgagcagcaggtagagagtaatgcgttggaagtgcatgtccacaacttgcgcaaaaag
cttggcaataaggagtggattcagaccattcgcggcgtggggtatcgtttagcatgtggc
taa
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