Idiomarina abyssalis: K5X84_05060
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Entry
K5X84_05060 CDS
T07548
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
iab
Idiomarina abyssalis
Pathway
iab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K5X84_05060 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iab02000
]
K5X84_05060 (msbA)
Enzymes [BR:
iab01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
K5X84_05060 (msbA)
Transporters [BR:
iab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K5X84_05060 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
DEAD
AAA_29
APS_kinase
nSTAND3
MMR_HSR1
AAA_16
AAA_18
ABC_ATPase
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QZN91870
LinkDB
All DBs
Position
1074825..1076573
Genome browser
AA seq
582 aa
AA seq
DB search
MDSQIKKKTTFKRLLGYIKPYKAAFTLAIICMIGYSAIDTLFLSQIETLIDDGLTEQDSK
ILLYGALFVPFIFILRGLLNVASSYFLHWVGFKVVTKMRQQLFDHMMKLPVSFHDQHSTG
DLISKITYDTQQVAEASSRALLVLIKEGAFVIGLLGLMFYQSWQLSLVFLVVGPLIAKVV
GVVSKRFRKVSSRIQTAMGNVTTTAEQMINGHKVVVMHQGQKGESARFSEINNITRNQNM
KLVNTRAISTSVIQFIASLSLSMVLVIASFPEMLGELSAGAFTTLLTAMIMLLRPLKQLT
NVNSDFQRGIAAATSVFDILDEPIEIDKGSRVIDRAAGDIVFEDVTFAYQKDDEPALQQI
NFSVKQGKTLALVGRSGSGKSTISNLLTRFYDVEQGRILLDGYNINDYKLKCLRRQFALV
SQNVTLFNDTIANNIAYGAAKELSREQITKAAEQAYVTEFTDNMPKGLDTMVGENGVMLS
GGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRQNRTAIVIAHRLSTI
ENADEIIVMDNGEIVERGTHQQLLDHEGAYYQLHNLQFSGGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggattctcagattaaaaaaaagacgaccttcaagcgcttgttaggttacatcaaacct
tataaagcggcctttacccttgctattatctgcatgattggctattcggccattgatacc
ttatttttgtcccaaatagaaactttaattgatgacggtttaactgagcaagactctaaa
atattgctctacggtgcgctttttgttccttttatttttatccttagagggttactaaac
gtagcttccagctatttcctgcattgggttggctttaaagttgtcactaaaatgcgtcag
cagttattcgaccatatgatgaagctgcctgtcagctttcacgaccagcactcaaccggt
gacttaatctcgaaaataacttatgacactcagcaagtagccgaagccagtagccgcgcg
ctactggttttgattaaggaaggtgcgtttgttattggcttgcttggcttgatgttttat
caaagttggcaactgtcgttagtatttttggttgtaggtcctttaattgctaaagttgtt
ggggtcgtgtccaagcgcttcagaaaagtcagtagtcgtatccaaacggctatgggcaat
gttacaacaaccgctgaacagatgattaatggccacaaagtggtcgtaatgcatcaagga
caaaaaggtgagtctgcacgtttctccgagatcaataacattacccgtaaccagaatatg
aaactggttaatacgcgggccattagtacttcggttattcagttcatcgcttctttaagc
ttgtccatggttttggttattgccagttttccggagatgctgggagagctttcagccggc
gcatttacaactttgctgacagccatgattatgttgctgcgcccattaaaacagttaacg
aacgtgaacagtgatttccagcggggtatagccgcggctaccagtgtgtttgatattctt
gatgagcccattgaaattgataaagggtctcgagttattgatcgtgcggccggggatatt
gtttttgaagatgtgacttttgcttatcaaaaagatgatgagccagcacttcagcaaatt
aattttagcgtaaaacaaggcaaaacccttgcattggtgggtcgctcgggcagtggtaaa
tcgacgatttctaacctgctgacccgattttatgatgtcgagcagggacgtattttgctc
gacggctacaacattaacgactataaactgaaatgcctgcgtcgccagtttgcgctggta
tcacaaaacgtgaccctgtttaatgacactatcgctaataatattgcttatggtgcagcg
aaagagttgtcacgggagcaaatcactaaagcagcagagcaggcttacgttaccgagttt
actgataacatgccgaaaggtctggacaccatggtcggcgaaaacggagtgatgttatcc
ggagggcagcggcaacgtattgctattgctcgtgcattactgcaggacgctcctattctg
attctggacgaagctacatcggcgctggacaccgagtctgaacgtcatattcaggatgct
ttaggcaccttgcgtcaaaaccggaccgccattgtcattgcacaccgcttgtcgaccatt
gaaaatgcggacgaaattatcgtaatggataacggcgagattgttgagcgaggtacccat
cagcagttactggatcacgaaggcgcgtattatcaattgcataacttgcagtttagcgga
ggcgcctag
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