Idiomarina abyssalis: K5X84_05075
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Entry
K5X84_05075 CDS
T07548
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00541
Biosynthesis of various nucleotide sugars
iab01100
Metabolic pathways
iab01250
Biosynthesis of nucleotide sugars
Module
iab_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K5X84_05075 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
iab01005
]
K5X84_05075 (kdsB)
Enzymes [BR:
iab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
K5X84_05075 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
iab01005
]
Lipid A
K5X84_05075 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
DUF2064
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
QZN91873
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Position
1077743..1078504
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AA seq
253 aa
AA seq
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MSFTVVIPARYGSSRLPGKPLADIGGKPMIQHVVERAEASGAAEVIVATDDLRVKEGVEK
FGGRVMMTSTEHSSGTERLAEVIEQLALAENEVVVNVQGDEPFIPPEIIRQVADNLANQR
QAPMATLAVPITDAEDIFNPNTVKVVTDAAGYALYFSRAAIPWDREHFSAERDTNVIADH
YHRHIGIYAYRAGFVRRYIEWQASPIEQLESLEQLRVLWHGERIHVAEAILAPAAGIDTE
EDLQRARERAVDG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaccgttgttattcccgcacgttatggctccagccgactgcctggtaaacct
ttggctgacataggtggtaaaccaatgattcagcatgtggttgaaagggctgaagccagt
ggcgctgcggaggtgattgtcgcaactgatgatcttagggtaaaagagggcgttgagaaa
tttggcggccgagtcatgatgacttcaacggaacattcatcgggtactgagcgactggct
gaggttattgaacagttggcgcttgcggaaaacgaagtggtggttaatgtgcagggcgac
gagcctttcattccgcctgaaattattcggcaggttgcggataacttagccaaccaacgg
caggcgcctatggcgactttagccgttcctattaccgacgctgaagatattttcaacccg
aatacagttaaagtggttaccgatgcggccggatacgctctgtactttagccgtgcagct
attccatgggacagagagcacttttctgcagagcgggataccaatgtcattgccgatcat
taccaccgacacattggtatttatgcctatcgggcaggttttgtcagacgttatattgag
tggcaggctagccctatagagcagcttgaatccctagaacagttgcgagtgctttggcac
ggggagcgtattcacgtggccgaagctattctcgcgccggctgctggtattgatacagaa
gaagacctgcagcgggcacgagaacgggcagtcgatggttaa
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