Idiomarina abyssalis: K5X84_05705
Help
Entry
K5X84_05705 CDS
T07548
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iab03400
]
K5X84_05705 (phrB)
Enzymes [BR:
iab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K5X84_05705 (phrB)
DNA repair and recombination proteins [BR:
iab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K5X84_05705 (phrB)
Prokaryotic type
K5X84_05705 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QZN91994
LinkDB
All DBs
Position
1207886..1209292
Genome browser
AA seq
468 aa
AA seq
DB search
MRDAIWFRSDLRMLDNPALLHACKSDEAPVAVFFACYETWDNHNWAPIKVDFLWRNLKSL
QQDLADNGIELEVRLVPKFSQVPGALRQFCREHEVKRVHINAEYALDEKRRDAAVEAVLS
NDDIELITYHGNLLVAPGQVRTQQGDYYKKFTPFNRRWRQVISELGQNDPSKITPYTMVK
AKGLPELPFKSKDSSDWSAGEQEALGKLGQFVGHSVSQYKSARDIPAESGTSKLSAYLAL
GVVGPQTAARALHQFSPEFPFGLPSGADTWLTELAWREFYQHLMYFVPRLSKGESFQAET
DSIQWLDDSDAFQRWCEGRTGYPIVDAGMRQLTSTGWMHNRLRMITANFLVKDLLVDWRK
GEAFFMQHLIDGSFPANNGGWQWSASVGTDAVPYFRVFNPVKQSEKFDPEGEYIRKWVHE
LKEVPTKYIHWPHSWLQQQSSNNYCEPVVEHKFARERFLTTFKQVKNG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgcaatttggttccgtagtgacttgagaatgttagataacccggcgttactt
catgcctgtaaaagtgatgaagcgccggttgctgtattttttgcctgttatgaaacctgg
gataaccataactgggcgccaataaaagtcgattttctttggcgtaacctgaagagtcta
caacaagatttagcagataacggaattgagcttgaagtcaggttggttccaaaattcagc
caggttccgggggcgcttaggcagttttgccgtgaacatgaagttaagcgggttcatatt
aacgcagagtatgcgctcgatgaaaaacgtcgggacgcagcggtagaagctgtactcagc
aacgatgatatcgaacttataacttaccatggaaacttactggttgcccccggacaagtc
aggacgcagcagggtgattattataagaagttcactccttttaaccgacgttggcgacaa
gttatcagcgagctagggcaaaatgacccctcaaaaattaccccctacaccatggtaaag
gccaaagggcttccggagcttccttttaaaagtaaggattcgtctgactggagtgcagga
gagcaagaagctttgggtaagttagggcagtttgttggccatagtgtatcgcagtataaa
agcgccagagacataccggcggaaagtggcacctcaaaactttctgcttatttagccttg
ggtgttgtcggcccgcaaaccgcggcgcgtgcgctgcatcagttttccccggagtttcct
tttgggctgccgtcaggagcagatacctggcttactgagttagcctggcgcgaattttat
cagcatcttatgtattttgtgccacgcttatctaagggtgaaagttttcaggctgaaacc
gatagtattcaatggttagacgacagtgacgcctttcaacgttggtgtgagggtcgtaca
ggatacccaattgttgacgccggaatgcgtcaattgacatcaactggatggatgcacaac
cgcttaaggatgattacagctaattttctggtaaaagatctactagtggactggcgaaaa
ggcgaagctttctttatgcagcatttgattgacggaagttttccggcaaacaatggcggc
tggcaatggagcgcttcggttggtaccgatgcagttccgtattttagagttttcaatcct
gttaaacaaagtgagaagtttgatcctgaaggggaatacattcgtaaatgggtacacgag
cttaaggaagtaccaacaaagtatattcactggcctcatagttggcttcagcaacaaagc
agtaataactattgcgaacccgtagttgagcataagtttgctcgagagcgattcttaaca
acgtttaagcaggtgaaaaatggataa
DBGET
integrated database retrieval system
