Idiomarina abyssalis: K5X84_05910
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Entry
K5X84_05910 CDS
T07548
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iab03032
]
K5X84_05910 (gyrA)
03400 DNA repair and recombination proteins [BR:
iab03400
]
K5X84_05910 (gyrA)
Enzymes [BR:
iab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K5X84_05910 (gyrA)
DNA replication proteins [BR:
iab03032
]
Prokaryotic type
DNA Topoisomerases
K5X84_05910 (gyrA)
DNA repair and recombination proteins [BR:
iab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K5X84_05910 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QZN92034
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Position
1255993..1258632
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AA seq
879 aa
AA seq
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MSDLAREVSPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELRNDFN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMAKIAHQLLADLDKETVNFVDNYDGTERIPDVLPTRVPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGSLAMIDNPDIDVEGLMEYIPGPDFPTAATISGRSGIVEAYKTGRGRI
HLRAQAEVEVDEKTGKETIIVTEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIRRGDVGEVVLNHLYANTQLQVVFGINMVALDKGQPRLFNLRDMLDCFIRHRRE
VVTRRSVYELRKARERAHILEGLAISLANIDEIIELIRRSPTPAEAKAGLIARAWQLGDV
ASMLETAGVDAARPDHLPEEYGIRGDNYHLTEEQAQAILDLRLHKLTGLEHEKILDEYKG
LLEQIAELLHILNSSERLMEVIREELVEIRSNFGDERKTDITAAAHDISMEDLINEEDVV
LTLSHEGYVKYQPLTEYEAQRRGGKGKAATKMKDEDFIERLWVANTHDTILCFSTRGRIY
WMKVYQLPLASRASRGKPIVNLLPLEADERITAILPTRDYPEDKFVVMATRKGTIKKTPL
PEYSRPRNGGIIALNLVDDDELIGVDITDGSGEIMLFSDAGKVVRFAEEQVRSMGRTATG
VRGIRLEEGQRVVSLIVPREYEEEEANVLTVTENGYGKRTPLSEYPAKSRATKGVVSIKV
SERNGSVVGAMEVIDGNEIMLISNKGTLVRTRVNEVSTVGRNTQGVRLIRTADDEKVVGL
QRIDEIDEDESLIDGEVIAEEGEVSSEDSSENQEGSDES
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagccagagaagtgtcaccggtaaatattgaagacgaactgaaaagttcg
tacctcgattatgccatgagcgtcattgttgggcgtgctttacctgatgtccgtgacggc
ctgaagccagtacacagacgtgtcttgttcgcaatgaacgaattgcgcaacgactttaat
aaaccttataaaaagtcagcgcgtgttgtcggtgatgtgattggtaaatatcaccctcac
ggagacagcgcagtttatgacacgattgttcgtatggcgcaggacttttcattgcgttat
atgttggttgatggtcaggggaactttggttctgttgacggagactcagccgcggcgatg
cgttataccgaaattcgcatggcaaaaattgctcaccagctattagccgacctggacaaa
gagaccgttaattttgtcgataactacgacggtacagagcgtattcctgatgtattgcca
acccgcgttccgaacctcttagtgaacggttcctcgggtatcgcggttggtatggcaact
aatattccacctcataacctgacggaagttattgacggctcactggcgatgattgataac
ccggatattgatgttgaagggttaatggaatacatcccgggtccggacttcccaacagca
gcgacaatttcaggtcgcagcggtatcgttgaagcttataaaaccggtcgtggtcgtatt
catttgcgcgctcaggcggaagtggaagtcgatgagaaaacgggtaaagaaaccatcatt
gttacggaaattccgtatcaggtgaataaagcccgcttaattgaaaaaatagctgaactg
gttaaagaaaagcgcgttgaaggtattagtgctttacgtgacgagtctgacaaagacggt
atgcgtatcgtcattgaaattcgtcgtggcgatgttggcgaagttgttcttaaccatttg
tatgctaatacccagttacaggttgtgtttggcattaatatggttgccctggataaaggt
cagccgcgtctgtttaacctgcgcgatatgctggattgcttcattcgccaccgtcgtgaa
gtggttacccgccgctcagtctacgaattacgcaaagctcgtgaacgtgctcatatcctg
gaaggtctggcgatatcgctggctaatattgacgaaattattgagcttatccgtcgttca
cccacgcctgctgaagctaaagctgggctaattgcccgcgcatggcagctgggtgatgtt
gcttcaatgctggaaaccgccggtgttgatgctgcgcgtcctgatcatctgcctgaagaa
tacggcattcggggtgacaactatcacctgacggaagaacaggctcaggccattttggat
ttacgtctgcataaactgactggtttagagcacgaaaaaattctggatgaatacaaaggc
ctgttagaacaaattgctgaactgctgcatattctgaacagttcagagcgcctgatggaa
gtaattcgtgaagagctggttgaaatacgcagtaactttggtgatgagcgtaaaaccgat
attaccgccgctgcacatgacatcagcatggaagacttaatcaacgaagaagatgttgtt
ctgacgctttctcacgaaggttatgtgaagtatcaaccgttgactgagtacgaagctcag
cgccgtggtggtaaaggtaaagccgccactaagatgaaagacgaagactttattgaaaga
ctgtgggtagcgaacacgcatgacaccattttatgcttctcaacccgtggtcgtatttac
tggatgaaagtttaccagttgccgctggcaagtcgtgcttctcgaggcaagcctatcgtc
aacttgttaccgcttgaagccgacgaacgtattaccgctattctgccaacacgggattac
ccggaagataagttcgttgttatggctacccgtaaagggaccattaagaaaacgccatta
ccagagtactcacgtcctcgtaacggcggaatcattgcactgaacctggttgatgacgat
gaactgattggtgttgatatcactgacggcagcggcgaaattatgctgttctctgacgct
ggcaaagtggtgcgcttcgcggaagagcaagtgcgttcaatgggtcgtacagcaaccggt
gttcgtggtattcgtttggaagaaggacagcgtgttgtatcactgattgttcctcgcgaa
tacgaagaggaagaagcgaatgtattaaccgtgactgaaaacggttacggcaaacgtaca
ccgctaagtgaatatccggctaagagtcgtgcgaccaaaggtgttgtctctattaaggtc
agcgagcgtaatggttccgttgtcggcgccatggaagttattgatggcaatgagatcatg
cttatcagtaataaaggtactctggtcagaacgcgtgttaatgaggtctcaaccgttggt
cgtaacactcagggcgtacgcttaattcgtacagctgatgacgaaaaagtggttggcctg
cagcgcattgatgaaattgacgaagatgagtctctcatcgacggcgaagtcattgctgag
gaaggcgaagtctcttctgaggatagctctgaaaatcaagagggttccgacgagtcatga
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