Idiomarina abyssalis: K5X84_05935
Help
Entry
K5X84_05935 CDS
T07548
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
iab
Idiomarina abyssalis
Pathway
iab03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
K5X84_05935 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
iab03011
]
K5X84_05935 (rpsA)
Ribosome [BR:
iab03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
K5X84_05935 (rpsA)
Bacteria
K5X84_05935 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QZN92038
LinkDB
All DBs
Position
1263036..1264715
Genome browser
AA seq
559 aa
AA seq
DB search
MSENFAELFEESLKEVETRPGSIVKGTIVAIEKDLVLVDAGLKSESAIPAEQFRNAEGEL
EVSVGDEVDVALDAVEDGFGETILSREKAKRYEAWLQLEKAHEDNATVIGIISGKVKGGF
TVDLGGVRAFLPGSLVDVRPVRETTHLENKDLEFKVIKLDQKRNNVVVSRRAVIEKENSA
EREELLENLQEGQEVQGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
ITVKVLKFDRERTRVSLGLKQLGEDPWADIANRYPEGHRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNVHPSKVVNLDDTVEVMVLEIDEERRRISLGLKQCKPNPWEEFAKN
HNKGEQVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNATGEEAVRDYKKGEEVTAVVM
QVDAERERISLGIKQLEEDPFNNYLAANKKGAIVTGTVTEVDAKGAKVELAESVEGYVRA
ADISRERVEDASTELSVGDSIEARFMGVDRKNRTLSLSIKAKDEAEEKEAVESVNKQQES
GGLNSAMAEAFKAAKTDDE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaattttgcagaattatttgaagaaagcctaaaggaagttgaaacacgcccg
ggctccattgttaaaggtactatcgttgccatcgaaaaagatttggtcttagtagacgcg
ggtcttaaatcagaaagcgcgattccagcagaacagttccgtaatgcagaaggtgaatta
gaagtcagcgtcggtgacgaagttgatgtagcccttgatgcagtagaagacggctttggt
gaaaccattctgtctcgcgaaaaagcgaaacgttacgaagcatggctgcagcttgaaaaa
gcacacgaagacaatgcaaccgttatcggtattatttctggtaaggttaagggtggcttc
acagtagacttaggcggcgttcgcgcattcttgcctggttcactggttgatgtacgtcca
gtacgtgaaacaacgcacctggaaaacaaagatttagaattcaaagttatcaagcttgat
caaaaacgtaacaacgttgttgtgtctcgccgtgctgttatcgagaaagagaacagtgca
gagcgtgaagagctgcttgaaaacttgcaagaaggtcaggaagttcagggtatcgttaag
aacctgactgactacggcgcattcgttgatttaggcggcgtcgatggcttattgcacatt
actgatatggcttggaaacgcgttaagcacccaagtgaaatcgtaaacgttggcgatgaa
atcactgttaaagtattgaagtttgatcgtgagcgcactcgtgtatctcttggccttaag
caattaggcgaagatccatgggcagatatcgcaaaccgttacccagaaggtcaccgttta
actggtcgtgttacgaacttgactgattacggctgcttcgttgaaatcgaagagggtgtt
gaaggtctggtacacgtctcagaaatggactggactaacaaaaacgttcatccttctaaa
gtggttaacctggacgacactgttgaagttatggttctggaaattgacgaagaacgtcgt
cgtatttcactaggccttaagcagtgcaaacctaacccttgggaagagtttgcgaagaac
cacaataaaggcgagcaagttactggtaagatcaagtcaatcactgacttcggtatcttc
atcggtcttgacggcggtattgatggtttggttcacttgtcagacattagctggaacgct
actggcgaagaagccgttcgtgactacaaaaaaggtgaagaagttaccgctgtagttatg
caggttgatgctgaacgtgagcgtatctcactaggtatcaagcagcttgaagaagaccca
ttcaataactacctggcagccaataaaaaaggtgctattgttacaggtacagttactgaa
gtagacgctaaaggcgctaaagttgaattagctgaaagcgttgaaggctatgttcgtgca
gcagacatctcacgtgagcgtgttgaagatgcaagcactgaattaagcgttggtgattct
attgaagctcgcttcatgggcgttgatcgcaaaaaccgtactctgagcttgtctatcaaa
gcgaaagacgaagcagaagagaaagaagcggttgaaagcgtcaacaagcagcaagaaagc
ggcggtcttaacagcgcaatggctgaagcctttaaagctgcaaaaactgacgacgaataa
DBGET
integrated database retrieval system
