Idiomarina abyssalis: K5X84_06965
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Entry
K5X84_06965 CDS
T07548
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iab03021
]
K5X84_06965 (rpoS)
Transcription machinery [BR:
iab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K5X84_06965 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QZN89927
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All DBs
Position
complement(1475396..1476373)
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AA seq
325 aa
AA seq
DB search
MSRIKEESVDNAEINGEVNEETLVDSADSSAEELEEALLSSSTSYQKKMDATQLYLGEIG
FSPLLTAEEEVFYSRRALKGDKAARRRMIESNLRLVVKIARRYSNRGLPLLDLVEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELA
HKLDHEPTAEDIAESLDKPVGDITKMLRLNERISSVDTPIGGDNDKALLDILTDDSDTGP
EGILQDENLKINITEWLQSLNPKQREVLARRFGLMGYEPSTLEDVGHEIGLTRERVRQIQ
VEALRKLRDSLKQQGLTLDSLFSPE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcataaaggaagaatcagtcgacaatgcagaaattaatggtgaagttaacgaa
gaaacgttagtcgatagcgcggacagttctgcagaagagctggaagaagcgttattgtca
tcatccaccagttatcaaaaaaagatggacgcaacgcagctttatttaggagaaatagga
ttctctcctttattgactgctgaagaggaagtcttttattcccgccgagccttaaaaggc
gacaaggcagctcgccgccgaatgatagagagtaatttacgattagtggttaaaattgcc
cgtcgttattctaaccggggcttaccccttttggatttagttgaagaaggcaacctgggt
cttatcagagcagtcgaaaaattcgaccctgaacgtggttttcgcttttcaacttatgcc
acatggtggatacgacaaactatcgagcgagctattatgaatcagacgcgaaccatccgt
ctgccaattcatgtagttaaagagctgaatgtgtatcttcgtgctgctcgggaattagcg
cataagctggatcatgagccaacggctgaagatattgcagaaagtctggataaaccggtc
ggtgacattaccaaaatgctgcgcttgaatgaacgaataagttcagtcgatacgcctatt
ggtggtgataacgacaaagcattgctagacatattaacggatgattctgataccggcccg
gaaggcattcttcaggatgaaaatctgaaaattaacattaccgagtggctgcagtcttta
aatcctaagcaaagggaagtacttgctcgtcgctttgggcttatgggttatgagccgtca
acactggaagatgttggccatgaaatagggctgacgcgtgaacgtgttaggcagatacag
gttgaggctttacgaaaactgagggactcccttaagcagcaaggattaacacttgattcg
ttgtttagcccggaatag
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