Idiomarina abyssalis: K5X84_06990
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Entry
K5X84_06990 CDS
T07548
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iab03016
]
K5X84_06990
Enzymes [BR:
iab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K5X84_06990
Transfer RNA biogenesis [BR:
iab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5X84_06990
Prokaryotic type
K5X84_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QZN89932
LinkDB
All DBs
Position
complement(1479340..1480392)
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AA seq
350 aa
AA seq
DB search
MLAPQKVTLDELTRLNHGDRPEAEFKQTPQDFQVIEQLDVPDDGEGEHQWLWVRKEGANT
NFCAEKIARFSGVSAKNVSYSGLKDRQAVTWQWFSVQLPGKETLNWQELNDEEMSVERVI
RRTKKLKSGFHDGNRFVIRLGGVSSAQRLEALWKSVTEKGVINYFGEQRFGRNGDNVAQA
ERWLMANRPAQISRNKRSLYLSSLRSYLFNQIVAERLRQFGPEGTLAGDCVMLKGSRSVF
TVEQWDDELRQRFATNDIYLTAPLVGTTNKPLVKDEAEAFESSFLEPYKNWLEALRKLRV
DAARRSILLRVKEPELSWHGKDAELRFTLPSGAYATTVLNEIVDLSGESR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctggctccgcaaaaagtgacacttgatgagctgacgcgtttaaatcatggcgaccgg
ccagaggctgagtttaagcaaacaccgcaggactttcaggtaattgagcaattggatgta
cccgatgacggggaaggcgaacatcagtggctttgggtcagaaaagaaggtgcaaacacc
aatttttgtgctgagaaaatagcgcgtttttctggcgtatctgcaaaaaatgttagctat
tcaggattaaaagaccgtcaggcggtaacctggcagtggttttcagttcaattgccgggt
aaagaaacgctgaactggcaagagttgaacgacgaggaaatgtccgtcgagcgagtcatt
cgcagaacaaaaaagctaaagtctggttttcacgacggtaaccgatttgtgattcggctt
ggcggtgtcagctctgcgcagcggctggaagcgttatggaagagcgttactgagaagggt
gttataaactattttggtgagcaacgctttggtcgcaacggcgacaacgttgcacaggct
gaacgctggttgatggcaaaccgtcctgcacaaattagccgtaataaacgaagcttgtat
ttatcgtctctgcgcagttatttattcaaccagattgtggccgaacgactgcgtcagttt
gggccagaaggcacactggcgggtgattgtgtcatgctaaaaggctctcggtctgttttt
accgttgaacaatgggacgatgaactcaggcaacgctttgcaactaacgatatttattta
accgcacctctggttggcacgaccaataaaccgttggtaaaagatgaggcagaagcgttt
gaatcaagttttttagagccttataaaaactggctagaagcattgagaaaactacgggtc
gatgcggcgcgacgcagtatactattgcgcgtaaaagagccagagttaagctggcatggc
aaggatgctgaattgcgttttacgctgccttcaggcgcctatgcaacgactgtgttaaat
gaaattgtggacttaagtggtgaatccagatga
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