Idiomarina abyssalis: K5X84_08055
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Entry
K5X84_08055 CDS
T07548
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
iab
Idiomarina abyssalis
Pathway
iab02024
Quorum sensing
iab03060
Protein export
iab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K5X84_08055 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K5X84_08055 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K5X84_08055 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
iab02044
]
K5X84_08055 (ffh)
Enzymes [BR:
iab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K5X84_08055 (ffh)
Secretion system [BR:
iab02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K5X84_08055 (ffh)
Eukaryotic Sec-SRP protein
K5X84_08055 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
Helicase_RecD
AAA_30
AAA_16
AAA_33
DO-GTPase1
KTI12
YqeC
APS_kinase
AAA_31
AAA_14
Fe-ADH
Fe-ADH_2
ATP_bind_1
SLFN-g3_helicase
nSTAND3
TsaE
AAA_24
Rad17
AAA_19
6PF2K
ArsA_ATPase
Thymidylate_kin
DUF3782
AAA
Motif
Other DBs
NCBI-ProteinID:
QZN90131
LinkDB
All DBs
Position
complement(1687816..1689180)
Genome browser
AA seq
454 aa
AA seq
DB search
MFENLSERLSQTLHSIGGRGRLTEDNIKETLREVRMALLEADVALPVVKDFIGKVKERAV
GTEVNKSLTPGQVFVKIVQSELEAAMGEANAPLQLNTQPPAVILMAGLQGAGKTTSVGKL
AKYLTERQKKKVMVVSADVYRPAAIKQLETLAEQVGVEFFPSTTEQKPVDIANAAIAQAR
KQFIDVVLVDTAGRLAIDEDMMQEIQQLHSAINPIETLFVVDAMTGQDAANTAKAFSEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFLGVGEKNDALEPFHPDRVASRILGMGDM
LSLIEEVEQKVDKEKAEKVAKKVMKKGQFSLEDFRDQLVQMREMGGMMGLMTKMPGMGKM
TEQMKGQMDDKMTLRMEAIINSMTPKERTRPDVIKGSRKRRIAAGSGTQVQDVNKLLKQF
TQMQKMMKKMKGGGMQKMMRGMGGKLPPGMFPGR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttatcggaacgtttgtcgcaaacgctgcattctattggcggccggggc
cgactgaccgaagacaatattaaagaaacgttacgcgaagttcgcatggctttactcgaa
gccgatgttgctttgcctgtggtcaaagactttatcggcaaagtgaaagagcgggctgtt
ggcaccgaggtgaacaaaagtctcacgccgggtcaggtatttgtaaaaattgttcagtct
gagcttgaagcggcaatgggcgaggccaatgctccgttgcagttaaacactcagccaccg
gccgttattttaatggcgggtctgcaaggtgcgggtaaaaccaccagtgtgggcaaactg
gccaaatatctaactgaacgccagaagaaaaaagtcatggtggtcagtgccgatgtgtat
cgtcctgcggctattaagcagttggaaacgcttgctgagcaggttggggttgagtttttc
ccttctacgacagagcagaagccggttgatattgctaatgccgccattgcccaggctcgt
aaacagtttattgatgtggtgttagtggataccgctggtcgtttggccattgacgaagac
atgatgcaggaaattcagcaactgcactcagccatcaacccaattgaaacgctgtttgtg
gttgacgctatgactggtcaggatgcggcgaatacggccaaagcattcagtgaagctctg
ccgctaaccggtgttattctgactaagaccgacggtgatgcgcgcggtggtgctgcgctg
tctattcgtcatattaccggtaagcccattaaattcctgggtgttggtgagaaaaacgat
gcgctggagccgtttcatcctgaccgtgtagcctccagaattctcggcatgggcgatatg
ctttctttaattgaggaagttgagcaaaaagtcgataaagaaaaagctgagaaggttgct
aaaaaagtcatgaaaaaaggccagttctcactggaggactttcgtgaccaattagttcaa
atgcgggaaatgggtggcatgatggggttaatgaccaaaatgccgggcatgggtaaaatg
acggaacaaatgaaaggtcagatggacgataaaatgaccttacgtatggaagccatcatt
aattcgatgactccaaaagagcggacccgaccggatgttattaaaggctctcgtaagcgc
cgtatagcggccggctcaggtacacaggttcaggacgtgaacaaattacttaagcagttt
acccaaatgcagaaaatgatgaaaaaaatgaaaggcggcggcatgcaaaaaatgatgcgc
ggcatgggtggaaagttacctccgggaatgttccccgggcgttag
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