Idiomarina abyssalis: K5X84_08330
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Entry
K5X84_08330 CDS
T07548
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iab03000
]
K5X84_08330
Transcription factors [BR:
iab03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K5X84_08330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_11
HRXXH
Mga
HTH_5
MarR
Motif
Other DBs
NCBI-ProteinID:
QZN90175
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Position
1741015..1741881
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AA seq
288 aa
AA seq
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MNYKHLFYFWHVAESGHLTQTAQKLHVSQSALSAQIKQLEEWLGTPLFERQGRQLVLTQA
GYIARQYANRIFHEGENLVKQLKQGMDGADLVIRIGHASTMSRNFVEAFISDLVHQQDVQ
YRLHSMTPDQLFNELANHQIDLALANTNVRGSDKQLWQSRLLARQPVSVIGPPGRDIERL
TDASLRNKNWVLPPENMPQRAAFDMLSAEYKWQPRVLAEADDMAMLRLLARDTGALAVIP
DVVVRDELNNGQLKRYLTLPNVFEHFYAITLKRPFEHPMVARLLKRFA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaaacatctcttttacttctggcatgtggcggaaagtggccatttaacccaa
accgctcaaaaacttcatgtgtcgcaatcggcgttatcggcgcaaataaaacagttggaa
gaatggttaggcacgcctttgtttgagcgtcaggggcgacaactagtgctgactcaggcc
gggtacattgctcgtcagtacgccaaccggatttttcacgaaggtgagaacctggtcaaa
caactgaaacagggaatggacggtgcagatttagtgattcgcattggtcacgcctcgacc
atgtcacgtaactttgtcgaagcatttatcagcgacttagtgcaccagcaggacgtgcaa
taccggctgcactcaatgacccccgaccagttatttaatgagttggctaaccatcaaatt
gacctggcgctggcgaataccaacgtacggggcagtgacaagcaattatggcaaagccgc
ctgttagcgcgtcagccagtatccgttatagggccgccgggacgcgatatagaacgcctg
acagatgcctctttacggaacaaaaactgggttctaccaccggaaaacatgccccaacgt
gcggcattcgatatgttaagcgccgaatacaaatggcaaccacgggtacttgccgaggca
gacgatatggcaatgttgcgactactggcgcgtgataccggagccctggcggttattccg
gatgttgttgtgagggatgagttgaacaacgggcagttaaaacgctacctgactctgccc
aacgtgttcgaacacttttatgcgattactctaaagcgccctttcgagcatccaatggtg
gctcggcttctcaaacgctttgcgtag
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