Idiomarina abyssalis: K5X84_08850
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Entry
K5X84_08850 CDS
T07548
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iab03400
]
K5X84_08850 (radA)
DNA repair and recombination proteins [BR:
iab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K5X84_08850 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
GvpD_P-loop
AAA
AAA_22
AAA_16
RecA
AAA_14
Rad51
ABC_tran
Zeta_toxin
NTPase_1
Viral_helicase1
nSTAND3
AAA_24
cobW
DUF1207
AAA_29
AAA_5
A2L_zn_ribbon
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QZN90270
LinkDB
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Position
complement(1835185..1836549)
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AA seq
454 aa
AA seq
DB search
MAKAKSAYVCNDCGADFPRWLGQCTECKAWNTLTEIRLTSKTTSNSSDRRGFSGITDARV
QTLNEVDLQEVPRFSSGFQEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTLCKLAERM
PALYVTGEESLQQVAMRAQRLNLPTDKLRMLSETSVESICQLADKEKPAIMVIDSIQVMH
MADIQSAPGSVSQVREAAAFLTRYAKQKNVAIIMVGHVTKEGHLAGPKVLEHCIDCSVLL
DGSSDSRYRTLRGTKNRFGAVNELGVFAMTGGGLKEVSNPSAIFLQRAEDQGNGSVVMVV
WEGTRPLLVEIQALVDYSALANPRRVAVGLEQTRLALLLAVLHRHGGLQVSDQDVFVNVV
GGVKVSETSADLALLLAIVSSFKGEPLPRELIVFGEVGLAGEIRPVPNGLERLNEAAKHG
FKKAIVPVGNAPKTSPKGMEVIGVKNLQQALDVM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaaagtgcatatgtgtgtaatgactgtggtgcagacttccctcgttgg
ctgggacaatgcacggaatgtaaggcctggaatacgcttactgaaattcgtttaacgtct
aaaacaacctctaattcgtcagaccgtcggggctttagcggtattaccgatgccagggtt
cagactcttaacgaggtcgacttgcaggaagtcccgcgtttcagctcgggttttcaggaa
tttgaccgggttttaggtggtggtgtagtccccggttcggcaatactgataggtggttca
cccggtgccggtaagagtactttattattgcaaaccctatgtaagttggcggagcgtatg
ccagcgctttacgtgaccggtgaggaatctttgcagcaggtagcaatgcgggcacagcgg
cttaatctgccaaccgacaaattgcgcatgctctctgaaacctcggtagaaagtatttgt
cagctggccgacaaagaaaaacctgccattatggtcattgattcgattcaggtaatgcat
atggctgacattcagtcagcgccgggcagtgtttcgcaggttcgtgaggcggcagctttt
ttaacgcgctacgcaaagcaaaagaacgttgccattattatggtaggacacgtgaccaaa
gaagggcatttggcggggcctaaagttctggagcattgcattgactgctctgtacttctg
gatggctcatcagactcgcgctatcgcactctgcgcggtactaaaaatcgctttggtgca
gtgaacgagcttggcgtatttgcgatgacaggcggtggtttgaaagaggtttcaaatcca
tcggctatattcctgcaacgagcggaggaccagggaaatggctcggttgttatggtggtt
tgggaaggtacgcgaccgctattggttgaaattcaggcgctggttgattactcggctctg
gcaaacccacgccgggttgctgtggggctggaacaaacgcgattagcattattactggct
gttttgcatcggcacggtggcttgcaggtgtctgatcaagacgtttttgtgaacgttgtt
ggtggcgttaaagtctccgaaacgtcagcagacttagcgttgttgcttgccattgtctcc
agctttaaaggagaaccattgccgcgcgaattaattgtgtttggtgaggttggtctggcc
ggtgagatacgcccggtacctaatggcctggagcgattaaacgaagcggctaaacacggt
tttaaaaaagccattgtgcctgtcggtaatgcgccaaaaacgtcaccaaaaggcatggaa
gtgattggcgtgaaaaaccttcaacaagcactggatgtgatgtag
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