Idiomarina abyssalis: K5X84_10120
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Entry
K5X84_10120 CDS
T07548
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iab03000
]
K5X84_10120
Transcription factors [BR:
iab03000
]
Prokaryotic type
Helix-turn-helix
Other families
K5X84_10120
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_23
HTH_28
AAA_5
HTH_IclR
HTH_30
AAA_2
HTH_29
HTH_22
HTH_Tnp_1
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QZN90504
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Position
complement(2086760..2088274)
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AA seq
504 aa
AA seq
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MSATQYTTKHAVDELVDSYQRVPMLVIATHPDRSRIGERAALIDLHNEGNDYLSRVKPEF
AKNGNAGRALLDEFISRSPIIFQSEPDGRIKLRAHSTKTTVTVVGRGVQDEYVLHERELD
NGVVIGLNHRIVLLLKLLPLHDSAVDDNDVLFGISSDIRAIRQRVEQLASMSLPVMIRGA
AGVGKQQAAYAIHQASERRDKPFISVNLAAIHDAVAEAELFGSERDGNRQLGYFEQANGG
TIVLEDIEDASVNVHRLLHTVLQSGSVVPVGTEDTQPINCRIMLTSHKDPGDIEENSTLS
MLIEKLSAYQLFIPPLTERREDIGLLFDYFVREQWQKLYGNRAYDAKISGELMSQLMTFH
WPGNVRQLRNVARQVVIDSRDQEQLHLDPQLLSMLRPTSVNGHWEEETHVQRRPNSVSRN
ELLETLESCRFELQATAKKLGISRASVYQLIQRFEGVRTAQDLSEEEIKQSYEKNRSDTE
KMMWDLQVSQIGLRRRLKSLGYDI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaactcagtacacgacaaaacacgcggttgacgaactcgttgacagttatcaa
cgagttcccatgttagttattgcaacgcacccggatagatcacggataggcgaacgtgcc
gcattaattgatttgcacaatgagggcaatgattatttaagccgggtaaaacccgaattc
gctaaaaatggcaatgccggtagagccttgcttgatgaatttattagtcgttcacccatt
atttttcaaagtgaacccgatgggcgcataaagcttcgggcacatagcaccaaaacgacg
gtaaccgttgttggccggggcgttcaggacgagtatgtgctgcacgaaagagagctggat
aatggcgtggttattggtttaaaccatagaatcgttttattgttgaagcttctgccgctg
catgactctgcggttgatgataacgatgtactttttggtatcagttccgatattcgggct
atcagacaacgtgtagagcaactggccagtatgagcctgccggttatgattagaggtgcg
gccggagtaggaaaacagcaggcggcttatgccattcatcaggccagtgaaaggcgcgac
aagccgttcatcagcgtgaacctcgctgcaattcatgacgcagtcgccgaagctgaactg
tttgggagcgaacgcgacggaaaccgtcagcttggctattttgagcaagcaaacggtgga
actattgtacttgaagatatcgaagacgcttcggtgaatgtgcatcgcttattgcacact
gttctgcaaagtggctcagttgtccctgtcggcaccgaggatacgcagcctatcaactgt
cgtattatgcttaccagccataaagaccctggcgacattgaagaaaactcgacgttatcg
atgctcattgaaaagctatccgcttatcagttgtttattccgcctttaacggaaaggcgt
gaagacattggcttgttgttcgattattttgttcgggaacaatggcaaaagctttatggt
aaccgcgcgtacgatgcgaaaatttccggtgaactaatgagccagctaatgacatttcat
tggcctggcaatgtgcggcagttgcgaaatgttgctcgacaggtggttattgatagccgc
gatcaggagcaattgcatttggatccgcaactactctctatgcttaggcccacctcggta
aatggtcattgggaagaagaaacacatgttcagcggcgaccaaacagtgtgagccgcaac
gagttattagaaacgctggaaagttgtcgctttgagctgcaggctacagcgaaaaaactc
ggtatttcccgagcgtctgtttatcagttaattcaacgttttgaaggtgtgcgaaccgca
caggatttatccgaagaagagattaagcaaagctacgagaaaaaccgttctgacaccgaa
aaaatgatgtgggatttacaagtatcacaaattggtttgaggcgcaggctgaaaagtttg
ggatatgatatttga
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