Idiomarina abyssalis: K5X84_10270
Help
Entry
K5X84_10270 CDS
T07548
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
iab03009
]
K5X84_10270
Ribosome biogenesis [BR:
iab03009
]
Prokaryotic type
ribosomal protein modification factors
K5X84_10270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QZN90534
LinkDB
All DBs
Position
2126340..2128514
Genome browser
AA seq
724 aa
AA seq
DB search
MEINVNFLDNMRLEAKFDDFTVISDQPIRYKGDGSAPGPFDYFLASSVMCAAHFIRLYCD
ARDIPTENIRISQNNVVDPEDRYKQLFKIQVELPADVSEKDRKAIIRAAERCAVKRVIEN
DLEFDVEAVESITQDAQALLTIRPDSDSRTFIEGKDLPLEQTIANMTAILADLGMKIEIS
SWRNIVPHVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLSCNFFYNDQYFGEE
IANAEFVHYPNEKWFKPGVNDELPTEILDEYCREFYDPEGELRGSHLIDTNSGRADRGIV
SLPFVRHSDGKTVYFPSNLIENLYLSNGMSAGNTLPEAQVQCLSEIFERAVKKQIIEEEI
ALPDVPLEVLNKYPNIQEGIKALEEQGYPVLVKDASLGGQFPVACVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPAPTFNSMAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDIEFVEWDFSGSNQEEADTLFGILQDMGKEAYVAVHEDLGAPVCRILVPGYSEVY
PVEDLIWDNTNIALQYREDILNLHRLTDDQLEDLVERLEDSQLDNYMDIITLIGIEFDEN
TVWGQLTILELKLLIYLALQRHDDAFEYVEMFLQFNDNTVERTLFYRAVEAVLEITLDEE
LELDDYRYNLGRMYGEKTIEAVIGSVKGTARFHGLEPTNMQLEGLDRHLRLIESYKKLHT
ARAK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaatgtaaactttctcgacaatatgcgccttgaggcaaaattcgatgacttc
acggttatttcggatcagcccattcgatacaaaggcgacggttccgcccccggccctttt
gactactttctggcgtcttccgttatgtgcgcggcgcacttcattcgtctgtattgcgac
gcccgcgatattccaaccgagaatatccgcatttcacaaaacaacgttgtcgacccggaa
gaccgctacaagcagttgttcaaaattcaggttgaattaccggccgatgtttccgagaaa
gaccgcaaagccattattcgggcagctgagcgttgtgccgttaagcgcgttatagaaaat
gatctggaattcgacgttgaagcggttgaaagcattactcaagacgctcaggcgttactg
accatacgccctgacagcgacagcagaacctttattgaaggcaaagacttaccgctggaa
caaaccattgccaatatgaccgccatactggcggacttaggcatgaagatagaaatatct
tcctggcgtaatattgtcccgcatgtctggtcgctgcatattcgcgatgccgcctctcct
atgtgctttaccaatggcaaaggcgccaccaaagaaagtgccttatgctctgctctgggc
gagtttattgagcgtttaagctgtaacttcttttataacgaccaatactttggcgaagaa
atagcaaacgccgaattcgtacactaccccaacgaaaaatggtttaaacccggcgtgaac
gacgagcttcccaccgaaattctggacgaatactgtcgtgaattttatgacccggaaggc
gagctgcgaggttcacacttaattgatactaactcgggtcgggctgaccgcggtattgtg
tccttgccgtttgtgcgtcattccgacggcaagacggtctattttccgtcgaacttaatt
gaaaacctgtatttaagtaacggtatgagtgcgggtaacactctgcccgaagcacaggtt
cagtgcttatcagaaatttttgagcgcgccgttaaaaagcaaattattgaagaagaaatt
gccctgccggacgtaccgctagaggtacttaacaagtacccgaatattcaggaagggata
aaagccttagaagaacaaggctacccggtattggttaaagacgcatcgttgggcggtcag
ttcccggttgcctgtgttaccttaatgaacccacgcaccggcggtgtttttgcttctttt
ggtgcgcacccaagctttgaagtggcgctggagcgcagcctgaccgagttattgcaaggc
cgaagctttgaaggtttaaacgacctcccggcaccaacctttaactccatggctgtgacc
gaaccaaacaactttgttgagcactttattgattcgtcgggcgttgtgtcctggcgtttc
tttagcgccaagtccgacattgaattcgttgaatgggactttagcggctctaaccaggaa
gaagccgatactctgtttggtattttgcaggacatgggcaaagaagcttacgtagccgtg
catgaagaccttggcgcgccggtgtgtcgtattctggtcccgggctattcggaagtctac
cccgtagaagacctcatttgggacaacaccaatatagctttgcaataccgtgaagacatt
ctcaacctgcaccgcttaaccgacgatcagctagaagacttagttgagcgcttagaagac
agtcagcttgataactacatggatattatcaccctgattggtattgagtttgacgaaaac
acggtttggggtcaactcaccattcttgaattgaaactgcttatctaccttgcactgcaa
cgccatgacgacgctttcgaatatgtggaaatgttcctgcagttcaacgacaacaccgtt
gagcgtacgttgttttatcgcgctgttgaagcggtgcttgaaattactctggacgaagaa
ctggagctggatgactaccgctacaacttaggccgcatgtacggcgaaaaaaccattgaa
gcggttataggctctgttaaaggcactgcgcgcttccacggtttggaaccgaccaatatg
caactggaaggtctggacagacacttgcgccttatagagagctataagaagctacacacc
gccagagcaaagtag
DBGET
integrated database retrieval system
