Idiomarina abyssalis: K5X84_10615
Help
Entry
K5X84_10615 CDS
T07548
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00550
Peptidoglycan biosynthesis
iab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5X84_10615 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
iab01003
]
K5X84_10615 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
iab01011
]
K5X84_10615 (mrcB)
Enzymes [BR:
iab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
K5X84_10615 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K5X84_10615 (mrcB)
Glycosyltransferases [BR:
iab01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
K5X84_10615 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
iab01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
K5X84_10615 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QZN90597
LinkDB
All DBs
Position
complement(2204352..2206619)
Genome browser
AA seq
755 aa
AA seq
DB search
MIKSRWFQYLFWTSFKIGLVLIAVIGLYAIYLDASLSRHFSNERYQAPALVYAGEVTLEK
NHPMRLQRLVDILERVGYQRNTNTEQSGYYSVGESNVMVHRRPFDFSDGPQMAQRVQVNF
RGERIESLKSWPSGRELERLRLEPELIGRISTLSKEDRLLVGLEVVPNLLIETLLKVEDQ
EFYHHQGVSPWSILRALVANLKAGRTVQGGSTLTQQLVKNIYLTREQTLWRKFHEAMMSL
VIDYRFDKNTILETYLNEVYFGQDGSNAIHGIGLASQFYFGKQVQELSPSEIALMVGMIK
GPSYYDPRRFPERARERRDTVLKVMFENDLVGKDNFVAAVEQKLDVKESRRLVEHPYPHY
MDLVRREMKRIVLPEDWEDTGLKIFTHLQVDTQNAVQRSLAKKLMADGEDEKLEGAMVVA
DYRRGTVTALAGGRLSQAIGYNRALLALRPIGSLMKPVIYAAAMQDSNIGLNTPVADEPV
TLSDKNGKEWQPLNYDEEFSGSLLLYDALVQSRNLPAVRVGMEVGIDQLVRYLRELGVTT
PLQAYPSLTLGSASLSPMAVARIYSALMNDGHYQPLTAVSSITTHQGEVLYRRQTPEQKK
VFDQSVSYLTRYGLHGVVAEGTASRLQSALAGQIVGGKTGTTNDYRDSWFVAVDGEQVVT
VWLGRDDNQPVGLTGSSGALKVAADFYGYLPPLSMALDVPEPLFMQNFHPTTGQRIPEDC
NNGRKLPAEEVRLPEDITCDGNIREKNWWERLFGG
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaagtcggtggtttcaataccttttctggacaagttttaagatagggctggta
cttatcgctgtaattggtctttacgcgatttacctcgatgccagcttatcccgtcacttt
agtaatgagcgctatcaggctccggcgttggtttatgctggtgaggtgacactagaaaaa
aatcaccctatgcgtttacaaaggttagtcgatattctggagcgggtgggctaccagcgc
aacactaacactgaacagtcaggttactattcggtcggcgaaagcaatgtcatggtgcac
cgtcggccttttgatttttctgacgggccgcaaatggctcaacgagtgcaggtaaacttc
cggggcgagcgcattgagtcgttgaaaagctggcctagtggtcgggagttagaaagatta
cgactggaacctgaattgatagggcgtattagcacgttgagtaaagaagaccgtttgtta
gttggtctggaggtggttcctaacttactcattgaaactttgctgaaagttgaagaccag
gagttttatcatcaccagggagtgtccccctggtctattctgcgggcactggttgctaac
cttaaagcaggcagaacggtacagggcggctcaacgcttactcagcaactggttaagaat
atctatctgaccagagaacaaacactgtggcgtaagtttcatgaagccatgatgtcgctg
gtgattgattaccgctttgataaaaacacaattttagagacctatctgaacgaggtttat
tttggtcaggatggcagcaacgccattcatggcattggacttgccagtcaattttatttt
ggtaaacaggttcaggagcttagtccgagcgagattgcgttaatggtggggatgataaag
ggaccttcctattacgaccccaggcgcttccctgagcgcgctcgcgagcgccgtgatacg
gtgcttaaggtcatgtttgagaatgacttagtcggtaaagacaactttgttgctgctgtt
gaacaaaagctcgatgttaaagagagtcgacgtttggtcgagcacccatacccacattat
atggatctggtgcggcgtgaaatgaaacgcattgttttaccggaagactgggaggacacc
ggattaaagatctttactcaccttcaggtagacacccaaaacgcagtgcaacgttccttg
gcaaaaaagctgatggcagatggcgaggatgagaaattagaaggcgctatggtggtagct
gactatcgtcgtgggacggttactgcgctggccggaggacgtttgagtcaggcaataggt
tataaccgcgcgttgttagccttaaggcccattggctccttaatgaaaccagttatttat
gctgcagctatgcaggactccaacataggtttaaatacgccggtggctgacgagcctgtt
accctgtccgataagaacggtaaagaatggcagccgctaaattatgatgaagaatttagt
ggcagcttactgctttatgatgcgcttgttcagtcgcggaacttgcccgcggtcagggtt
ggtatggaagtgggtatagaccagttagtgcggtacttacgtgagttaggcgtgacaaca
ccgttacaggcctacccatcattgacgctgggctctgcttcgctatctcccatggcggtc
gcgcgaatatacagcgcgttaatgaacgatggccattaccagcctttaacagcggtctcc
tcaattactactcatcagggagaggtcttataccgtcgtcagacacctgaacagaagaag
gtatttgaccaaagcgtttcctatttgacgcgttatggcttgcacggcgtggtcgctgaa
ggcaccgccagccggcttcaaagtgcactggccggacagattgttggtggcaaaacaggc
accacgaatgactaccgtgacagttggtttgtggctgttgatggagagcaagttgtgact
gtctggttagggcgggacgataaccaacccgttggtttaacgggaagcagcggagcactg
aaagttgccgccgacttctatgggtatctgccgccgttgagcatggcgctggacgtaccc
gaacctttgtttatgcagaattttcacccaactacggggcagagaattccggaggattgt
aataatggtcgtaaattaccggcagaggaagtcagactccccgaggatattacctgtgac
ggtaatatccgcgagaaaaactggtgggaacgtttgttcggtggctaa
DBGET
integrated database retrieval system
