Idiomarina abyssalis: K5X84_10775
Help
Entry
K5X84_10775 CDS
T07548
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iab03016
]
K5X84_10775 (trmA)
Enzymes [BR:
iab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
K5X84_10775 (trmA)
Transfer RNA biogenesis [BR:
iab03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K5X84_10775 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltrans_SAM
Methyltransf_12
DREV
Methyltransf_4
Methyltransf_15
RrnaAD
MTS
Malic_M
Motif
Other DBs
NCBI-ProteinID:
QZN90622
LinkDB
All DBs
Position
2240404..2241507
Genome browser
AA seq
367 aa
AA seq
DB search
MTYRSIETLNYEAQLIEKSNKIRQSFSEVGIEDFRVFPSEPVNYRMRAEFRVWHEGDDLY
YIMFNPETREKIRKDDFAPGSKLINSLMQGVIDHVIDKPLLRHKLFQVDFLTTKSNQAIV
SLLYHRPLEEEWQAEAKELHGYLQSFADVVHLIGRARKQKVVFGSESVIENVQVNGQTYQ
SIQTENSFTQPNSGINEKMIEWVSEQAGQNNHDLLELYCGNGNFTLPLAGQFNSVLATEI
SKGSVAAAREGAQLNGIENVTVVRMSAEEFSAALSGELESKRAADADIHSFDCKTVLVDP
PRAGLDKDTLKLVSQYQRIIYISCNPSTLIDNIKAISATHKVTAAAMFDQFPYTDHIETG
VVLEKHN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatcggtctatcgagactttaaattacgaagcacagcttattgaaaaatctaat
aagattcgccaaagctttagtgaagttggtattgaagactttcgcgtttttccatcagag
cctgtcaattaccgtatgagggctgagttcagggtatggcacgaaggtgatgatctttac
tacattatgtttaaccctgaaactcgggaaaaaatacgtaaagatgactttgctccggga
agcaagcttataaatagcctgatgcagggggtcatagaccacgttatcgacaaaccctta
ttgaggcataagttgtttcaggtcgattttctaacgacaaagtccaaccaggccatcgta
tcacttctctatcaccgccccttagaagaagagtggcaggctgaagcaaaagagttacat
ggctatcttcaatcctttgctgatgttgttcatctaattggccgggctcgtaaacaaaaa
gttgtttttggttctgaatcagttatcgagaatgttcaagttaatgggcaaacctaccag
tcaattcagaccgaaaatagctttactcaaccaaactcgggtattaacgagaaaatgatt
gaatgggtcagtgagcaggcgggccaaaataatcatgatttactagagctttattgtggt
aatggaaatttcactctgccattggccggtcagttcaattcggtactggcaaccgaaatt
agcaaaggctcggttgctgcagcccgtgaaggggcgcagttaaacggcatcgagaatgtt
actgttgtacgcatgtcagctgaagagtttagtgcggctttaagtggtgagcttgaatca
aagcgagcggctgacgcagatattcacagttttgactgcaaaacggtattggtcgatccg
cccagagctgggttagataaagacaccttgaaactggtttctcagtaccagcggatcatt
tatatttcctgcaacccaagtacgctaatagacaatattaaggcgatatcggctactcat
aaggtcacagcggcagcaatgtttgatcaattcccttataccgatcacattgaaacaggc
gtggttttagaaaagcacaactag
DBGET
integrated database retrieval system
