Idiomarina abyssalis: K5X84_10930
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Entry
K5X84_10930 CDS
T07548
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00730
Thiamine metabolism
iab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K5X84_10930 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
iab03009
]
K5X84_10930 (rsgA)
Enzymes [BR:
iab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
K5X84_10930 (rsgA)
Ribosome biogenesis [BR:
iab03009
]
Prokaryotic type
GTPases
K5X84_10930 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
GTP_EFTU
FeoB_N
AAA_16
nSTAND1
nSTAND3
MeaB
Septin
AAA_29
AAA_22
Roc
DUF87
RNA_helicase
AAA_7
Ras
SRPRB
ABC_tran
AIG1
AAA_33
NACHT
Motif
Other DBs
NCBI-ProteinID:
QZN92183
LinkDB
All DBs
Position
2270173..2271216
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AA seq
347 aa
AA seq
DB search
MVKRRRLNKGQQRRVSANQKKRLKNTDIEWTDNQLNAPEAGRVISRFGQHADIRDAEGNT
YRCHIRRVVDSLVCGDSVLWSRASAEQQGMQGVVVAVQERHSLLSRPDYYDGLKPVAANI
DQIFVISSVLPSFSSQIIDRYLVACEDIGIEPVIVLNKADLLPEIDETERQYIEQRLKDY
ESIGYKVLHVSSATQSGLDALQEMLKDHISIVVGQSGVGKSSLVNQLLPDVNADTNLVSD
NSGLGQHTTTVATWYDLKEGGALIDSPGIREFSLWHLEPERVARCYVDFRDYLGGCKFRD
CKHGDDPGCALQEAVGNNQLHEWRLSNYHRIIETMKTQKPSRAIRGK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaacgcagacgtctgaacaaaggccagcaacggcgggtttcagccaaccaaaaa
aaacggctgaaaaacaccgatattgagtggacggataaccaactcaatgcaccggaagca
ggccgtgttatcagccgcttcggtcagcacgccgatattcgcgatgccgaaggcaatacc
taccgctgccatatacgccgggttgtcgatagcctggtatgtggcgacagcgttctctgg
tccagagcaagtgccgaacaacaaggtatgcagggtgtagttgttgccgttcaggaaaga
catagcctgctgtcccgtcctgattactacgacggattaaagcctgttgccgctaacatt
gatcaaattttcgttatttccagcgtactccccagcttctcatcgcaaattatcgatcgc
tacttagtcgcctgcgaggacattggcatagagcccgttattgtgctgaataaggctgat
ttgctgcccgaaattgacgagaccgaacgtcaatatattgagcaaaggctgaaagactat
gaaagcatcggctacaaagtgcttcacgtcagcagtgcaactcaaagcgggctggatgct
ttgcaggagatgctgaaagaccatatttcgattgttgtcggtcagtcaggcgtgggtaag
tcgtcgctggtaaaccagctcttacccgacgtgaacgccgacacaaatttagtgtcagat
aactctggattaggacagcacacaacgacggttgcaacctggtatgacttaaaggaaggc
ggagcccttattgactcacccggtatccgggagttttcgttatggcacctggaacctgag
agagtagcccggtgctatgtcgatttccgcgactacctaggcggctgcaaattccgcgat
tgtaaacatggcgatgatccgggctgcgcactgcaagaggctgtcggtaacaatcaattg
catgaatggcgcctttctaattatcatcgcattatagagacgatgaaaacacaaaagccc
agtcgggcaattagaggtaagtaa
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