Idiomarina abyssalis: K5X84_11715
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Entry
K5X84_11715 CDS
T07548
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
iab
Idiomarina abyssalis
Pathway
iab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K5X84_11715 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iab03400
]
K5X84_11715 (priA)
Enzymes [BR:
iab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5X84_11715 (priA)
DNA repair and recombination proteins [BR:
iab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K5X84_11715 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
AAA_19
HVO_A0261_N
AAA_22
nSTAND_NTPase5
Zn_ribbon_FGT1_1
Zot
DAP3
Zn_ribbon_6
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QZN90796
LinkDB
All DBs
Position
complement(2437647..2439857)
Genome browser
AA seq
736 aa
AA seq
DB search
MKQANTGNERRYKVALPLPLRQTYDYLCKSAEPLPQGVRVRVPFGQRQLVGYVVTEANDE
PPTFELKSVSSVLDEQRLWPDDIWQLVRWSSDYYHHSLGDVAANSLPVLLRKGDAPEYLT
ETFYALTDLGLAQSINDLKGAARQQQVLAALKHKPLRRSDLTDIGVTSAVLRTLQDKGWI
EVREQAPAKPQSWQQKPSVLREQGHELNTEQAVAVSTINQQQKHSTLLLEGVTGSGKTEV
YLQAMQPVLERGEQVLVLVPEIGLTPQTLQRFKERFDAPVVMLHSGMSDRERLNTWLDAK
HGHAAIIIGTRSAVFTPCQKLGLIVVDEEHDLSYKQQDGFRYHARDIAIKRASLLNIPLV
LGSATASLETLNNAVNKRFHWLKLGQRAGGAQMVKHELIDLKQQPIKAGISKALREQIQV
EIERGNQVLLFLNRRGFAPALMCHECGWLAQCHRCDAYYTVHKTHQQLQCHHCGSQQRIP
RQCGSCGSPQMISHGVGTEQLEHSLKEMFPGRGVLRIDRDSTRRKGQLDDYLQKATNNEY
PLLVGTQMLAKGHHFPNVTLVALLDVDGALYSADFRAAERLGQLYTQVAGRAGREHKAGK
VVLQTHHPEHDLIQDLLNNGYSHFALTALAERQQSELPPFSYLALFRAEATDRDSVVQAM
TQIQQLMPQVDGAFLLGPMPALMERKAGRYRYQLLLHCQSRKLRFQLIEHLLPQINALPL
LKKVRWSLDIDPQDFS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagccaacaccggcaatgaacgacgttataaagtcgctctgccgttacctctt
cgacaaacctatgattatctgtgcaaaagtgctgagccgctgccgcagggagtgcgcgtg
cgcgtgccatttggtcagcgccagttagtcggctatgtggttactgaagccaatgacgag
ccgccaacgtttgagctgaagtcggtttcgtcggtattggatgagcaacgactgtggccg
gatgatatttggcaactggttcgctggtcttccgattattaccaccactcgctgggggat
gttgctgccaatagcctgccggttttgttgcgcaaaggcgatgcgccggaatacctgact
gaaactttttatgcgttgactgacttaggccttgctcagtctattaacgacttgaaaggg
gcggcgcgacaacagcaagtgctggcggcgctgaaacataagccgctcaggcgcagcgac
ttaaccgacataggtgtgacctcggccgtgcttcgtaccctgcaggataaaggctggatt
gaggtgcgtgagcaggcaccggcaaagccacaaagctggcagcagaagccatcggtatta
agagaacagggtcatgaattaaataccgagcaggcagtagcggtttcaaccattaaccag
caacagaagcacagtacgctattgctggaaggcgttaccggcagtggtaagactgaagtc
tacttacaggctatgcaaccggtactggaacgtggtgaacaggttttagtgctggtgcct
gaaattggcctcaccccgcaaaccctgcagcgctttaaagaacgctttgacgcgccggtg
gtgatgctgcactccggtatgagcgacagagagcgattgaatacctggctggatgctaag
cacgggcatgcagcgattattatcggtacccgttcggcggtgtttacgccttgccagaag
ctcggtcttattgtggttgatgaagaacatgacctttcgtataagcaacaagatggtttc
cgttatcatgcccgggatattgctattaaacgggcgtcgttgctgaatataccgctggta
ttaggcagtgctaccgcgtcgctggaaaccttaaacaatgcggtaaacaaacgctttcac
tggcttaagctggggcagcgcgctggtggcgcgcaaatggttaaacacgagcttattgac
cttaagcagcaaccgataaaagcgggcatctccaaagcactacgggaacaaattcaggta
gaaattgagcgcggtaatcaggtgctgttgtttttgaatcgtcgtggctttgcccctgcg
ttaatgtgtcatgaatgtggttggctggcccagtgtcatcgctgtgacgcttattatacc
gtgcataagacgcaccagcagctgcagtgccaccattgtgggagtcagcagcggatacca
cgtcaatgcggctcctgcggctcgccgcagatgatttctcatggtgtgggcactgagcag
ctcgagcatagtctgaaagagatgtttcctggccgcggggtactgcgcattgaccgggac
tcaacccgccgcaaaggccagttagacgactacctgcaaaaagccacaaataatgagtat
cctttgctggtcggcacgcagatgctggcaaagggccatcactttcctaacgtgacttta
gtggcgctgctggatgtcgacggtgcgctttacagcgctgactttcgggctgcagagcgt
ttaggccagctttatactcaggtggccggtcgcgcagggcgtgagcacaaagccggtaaa
gtggtgctgcaaacccaccatccggagcatgatttaattcaggatttgctcaataacggc
tattcgcatttcgcactgacggctttagccgaacgccaacaaagtgagctgccgccgttt
tcttatttagctctgttcagggctgaggcgacagacagagactctgtcgtgcaggccatg
acccaaattcagcagttgatgccgcaggttgatggtgcgtttttactggggccaatgcct
gccttaatggagcgtaaagctggtcgttaccgctatcaattgctgttacattgtcagtca
cggaaattacgttttcagttaattgagcacttgctgccgcagattaacgccttgccgtta
ttgaaaaaagtacgctggtcgctggatatcgatccgcaagacttcagctga
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