Idiomarina abyssalis: K5X84_12180
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Entry
K5X84_12180 CDS
T07548
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00300
Lysine biosynthesis
iab00470
D-Amino acid metabolism
iab01100
Metabolic pathways
iab01110
Biosynthesis of secondary metabolites
iab01120
Microbial metabolism in diverse environments
iab01230
Biosynthesis of amino acids
Module
iab_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K5X84_12180 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K5X84_12180 (lysA)
Enzymes [BR:
iab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K5X84_12180 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-ProteinID:
QZN90885
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Position
complement(2537921..2539183)
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AA seq
420 aa
AA seq
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MSELIDYKNGQFHIEGCDVESLIERFSSPLYVYSKGQILKNWREFQQYWPTPHKLCYAVK
ANSNLAILQLLAEHGAGFDIVSGGELQRVLMAGGKAEDIVFSGVAKSKDEIIMALEAGIG
CFNVESEAELERIQDIAAAMDKQAPVSLRVNPDVDAKTHPYIATGMKANKFGISMSLAKP
VFLKAHSLPNINLIGADCHIGSQIMTAEPFLDAAQRMFNLVAELEKDGINLTHLDLGGGF
GVAYQPEEPLDKAFYLKELVKLAESYPQITMVLEPGRAITADAGVLLTTVEYIKPSDDKN
FVLVDAGMNDLLRPSLYQAWHDILPAYENKRGGDQLNDVVGPVCETGDFFGHARHLHVQQ
GDVLIVKHAGAYGFTMASNYNSRGRPPEVLVSGENATLIRERESFNDLVRGEHLLHQEGQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattaattgactataaaaatggccagtttcacattgaaggctgcgatgttgag
agcctgattgagcgttttagctcgcctttgtatgtttactctaaaggtcagattttaaaa
aactggcgcgagtttcaacagtactggccaacccctcacaaactttgctacgcggtcaaa
gcgaacagcaacttagctattttacagctactggctgagcacggtgccgggttcgatatt
gtgtccggtggcgagcttcaacgcgtactcatggctggtggcaaagcggaagatattgtc
ttttccggtgtggctaagtcaaaagatgaaatcattatggcgctggaagcgggcattggc
tgctttaacgtagagtcggaggcggagcttgagcgtattcaggacattgctgctgccatg
gacaaacaggctccggtatcgttaagagtgaaccccgatgttgatgccaaaacgcatccg
tacattgccacaggcatgaaagccaacaagtttggcatcagcatgtcactggccaagccg
gtttttctgaaagcgcatagcttacccaatattaatttgattggtgcggactgtcacatt
ggctcgcagataatgacagccgaaccttttcttgatgcggctcagcgtatgtttaatctg
gtggcagagttggaaaaggacggtatcaacttaacccacttggatttaggtggcggtttt
ggtgtggcgtatcagccggaagagcctttggataaagccttttatttaaaagagctggtt
aaactcgccgaaagttacccgcaaattacaatggtactggaacccggtcgcgctattacc
gcagatgccggagttctgctgacgacggtggaatacattaaaccctcagacgataagaac
tttgtgctggtagatgccggcatgaatgacttattacgtccgtctttgtatcaggcctgg
cacgacattctgccggcatacgagaacaaacgcggcggcgaccaactaaacgatgtggtg
ggaccggtgtgtgaaaccggagactttttcggacacgcgcggcatttgcatgtgcagcag
ggcgatgtacttatcgtcaagcatgcaggtgcttatggcttcaccatggcatcaaattat
aacagccgaggccgtccgcccgaggttttggtctctggtgaaaatgctacacttatccgc
gagcgagagagctttaatgatcttgtccggggcgagcacttgttacaccaggaaggccaa
taa
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