Idiomarina abyssalis: K5X84_12330
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Entry
K5X84_12330 CDS
T07548
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
iab
Idiomarina abyssalis
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_2
AAA_16
HTH_29
HTH_23
Mg_chelatase
HTH_28
HTH_17
AAA_3
AAA_19
AAA
MCM
AAA_22
AAA_30
MerR
nSTAND3
HTH_7
RsmI_C
P22_Cro
AAA_29
HTH_Tnp_1_2
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
QZN90909
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Position
complement(2570743..2572083)
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AA seq
446 aa
AA seq
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MTAAKAMIGVIEDDPALQELLVEELEAEGYKVTAWGSVEGFKKAAATLDLIISDIRLPGQ
SGLSLLDSLKNEDNAPALLLITAFGTVDQAVDALKQGADDFLTKPLDVEHLLLSVQRILE
HRSLQRELKRYRQQQKGPGGLVGQSPSMRKLYDQIERIAPADGSVLITGESGTGKELVAK
ALHQLSDRAEQSFQAVNCAGIPADLMESEFFGHAAGAFTGAQKKRQGLLKQADGGTLLLD
EIGEMPMALQAKLLRVLQEGTIRAVGSDEEETVNVRILAATHQDLEKQVEDGRFRQDLFY
RLETFSLRVPPLRERGEDIERLANYFLQQLRKGSDKAVQSISPAALEQLYRYRFPGNVRE
LQNAIERAFTFSRDDKIAVEDLPQRILESAHEPEVEYAAEWPTLDEYQNQYIRKVLVHAE
GNKSKAAEILGVTRRTLYRWLEQHGE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaaaagccatgataggtgtaattgaggatgatccggctctacaggaactg
cttgttgaagagcttgaagctgaaggctataaggtaactgcctggggcagtgttgaaggc
tttaaaaaagccgctgcaactctggacttgatcattagtgatattcgcttgccgggtcag
tccgggctgtcacttttagacagcctgaaaaatgaagacaacgctccggcactgttatta
attacggcttttggcacggttgatcaggcggttgatgcgttaaagcagggcgcggatgac
tttctgaccaagcctttagatgttgaacatttattgctaagtgtacaacgtattcttgag
catcgctcgctacaacgagaactcaagcgctaccgtcagcagcaaaaaggaccgggtggt
ttagtcgggcagagtccgtcaatgcgcaagctttatgatcaaatagaacgtattgcgcca
gctgacggaagcgttctgatcaccggcgaaagtgggaccggtaaagagctggtggcgaag
gcgctgcatcagttaagtgaccgcgctgaacaaagctttcaggcggtaaactgcgccggc
attccggccgatttaatggaaagtgaatttttcggccatgcagccggggcttttaccggc
gcgcagaaaaaacgtcaaggtttattgaaacaggcagacggcggcactttgctactggat
gaaattggcgaaatgccaatggctttgcaggcgaaactattacgtgtgttgcaggaaggt
accatccgcgcggtaggcagcgacgaagaagaaacggtgaatgtccgcatattggctgct
acccaccaggacttagaaaagcaggttgaagacgggcgcttccggcaggacttattttat
cggctggaaacctttagtctgcgagtgccgcctttacgcgagcgtggagaagacattgaa
cgtctcgctaactactttttacaacagttgcggaagggcagcgacaaagcggttcagagc
atttcaccggctgcgctcgaacagctttatcgctatcgctttcctggtaatgtccgcgaa
ctgcaaaatgcgatagagcgtgcttttaccttttccagagacgacaaaatagcggttgaa
gatttaccgcaaagaattctggagagtgcgcatgaaccggaagtggaatatgccgcagag
tggccaactctggacgagtatcaaaaccaatatatacgcaaagtgctggtgcacgcagag
ggtaataaatcgaaagcggctgaaattcttggggtaacccggcgtaccttataccgctgg
cttgagcagcatggtgagtga
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