Idiomarina abyssalis: K5X84_12500
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Entry
K5X84_12500 CDS
T07548
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
iab
Idiomarina abyssalis
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iab03016
]
K5X84_12500 (mnmE)
Transfer RNA biogenesis [BR:
iab03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
K5X84_12500 (mnmE)
Prokaryotic type
Methyltransferases
K5X84_12500 (mnmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
ABC_tran
Arf
AAA_28
Roc
UBM
MT0933_antitox
SRPRB
AAA_29
Fervidolysin_NPro-like
Motif
Other DBs
NCBI-ProteinID:
QZN92199
LinkDB
All DBs
Position
complement(2605695..2607071)
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AA seq
458 aa
AA seq
DB search
MTTETDFDDTIVAQATPPGRGGVGIVRVSGKACKDVAEKLLGHCPKPRKAEYLPFYDLQK
QLLDEGIALYFPGPNSFTGEDVLELQGHGGPVLIDMIIKAILEIPGIRPARPGEFSERAF
LNDKLDLTQAEAIADLIDTNSEQAAKAALQSLKGEFSHKIDQLVDAVIHLRMYVEAAIDF
PDEEIDFLSDGKVSGDLAEIIDHLFHIEQEARQGTLMREGMRIVIAGRPNAGKSSLLNAL
AGRESAIVTEIAGTTRDVLREHIQIDGMPLHIIDTAGLRESPDHVEKIGIERAWDEIRQA
DRVLFMVDSQETSAIHPDDIWPEFFAQLPEDMPYTVIRNKVDLSEEPTGIDEHNGIPVIH
LSAKTGHGIELLREHLKHCVGYNTTAEGSFMARRRHLEALAKAKTHLLQGQEQLEANMAG
EILAEELRLTQQHLNEITGEFTSDDLLGQIFGSFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaaacagactttgacgacaccattgttgctcaggccacgccacccggacgc
ggtggtgttggtattgttcgcgttagtggcaaagcctgtaaagatgttgctgaaaaactg
ttaggccattgccccaaacctcgtaaagccgaatacttacctttttacgatttacaaaaa
caactgctggacgaaggcattgcgctttatttccctggtcctaactcctttaccggcgaa
gatgtcttagagctgcaaggtcacggcggacccgttcttatcgacatgatcattaaggcc
attctggaaattcccggtattcgtcctgcacgacctggtgaatttagtgaacgagcgttt
ttgaacgacaagcttgacctcacccaggcagaagctattgccgacttaattgataccaat
tcggagcaagccgctaaagccgcattacaaagcctaaaaggtgagttttctcacaaaatt
gatcagttggtggatgccgttattcacctacgcatgtacgttgaggcagccatcgacttt
ccggatgaagaaatcgactttctttccgacggtaaagtctccggcgatttagctgaaatt
attgaccacctgttccatatagaacaggaggcccggcaaggaacgcttatgcgtgaaggt
atgcgcattgtaattgccggacgtcctaatgcgggtaagtccagcttgcttaatgctctg
gcaggtcgcgagtccgccattgttaccgaaatagccggaaccacccgtgatgttctgcga
gaacacattcaaatagacggcatgccgctgcatattattgataccgccggtttacgcgaa
agcccggaccacgttgagaaaataggtattgaacgcgcctgggatgaaattcgtcaggca
gatcgcgttttatttatggtcgacagtcaggagacttctgccattcatcctgacgacata
tggccggaatttttcgctcagttacctgaagacatgccctacaccgttatccgcaataaa
gtcgacttatcggaagagcctaccggcattgatgagcacaacggcattccggttattcat
ttatccgccaaaactggccacggcattgaattactgcgcgagcacttaaagcattgtgtt
ggatacaacacaactgcagaaggaagctttatggccagacgcaggcacttagaggctctg
gctaaagcaaaaacccatttactgcagggtcaggagcaactcgaagccaacatggccggt
gaaatactggcggaagagctacgtctgacccaacagcacctcaatgaaattactggtgag
ttcacttctgacgatcttctcggccagattttcggttcgttctgtatcggcaaataa
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