Ignisphaera aggregans: Igag_1139
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Entry
Igag_1139 CDS
T01307
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
iag
Ignisphaera aggregans
Brite
KEGG Orthology (KO) [BR:
iag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iag03400
]
Igag_1139
DNA repair and recombination proteins [BR:
iag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Igag_1139
Archaeal homologous recombinant proteins
Igag_1139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_13
GAS
Baculo_PEP_C
AAA_15
ABC_tran
SbcC_Walker_B
COG6_N
AAA_29
DUF1664
Rad50_zn_hook
ATG16
FapA
LXG
COG5_N
SRC-1
V-SNARE
DUF4407
COG4_N
AAA_25
Syntaxin-6_N
ApoLp-III
LOH1CR12
AAA_27
Peptidase_M2
TolA_bind_tri
EzrA
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
ADM27951
UniProt:
E0SP05
LinkDB
All DBs
Position
complement(1059161..1061458)
Genome browser
AA seq
765 aa
AA seq
DB search
MSSTVIVRRVRLRNILSHENTDIVFPMGLIALVGPNGAGKSSIVDSIVYAMFVSPKSGRS
FRGEGKKGILRIGTSEGSIELELSVSGKIYRIQRIISVSRPETAKISEVDENGNERVIAV
GVDNVLDVIRSILGIPSSDAIRLTVVSRQNELSRLIEEQPSRRKELILRLLGLEELEKAK
DLLKQALDGAERARIRFDEIRRMINDITNELSRLEKEVSEKRERLDRLNLEINSLRERLS
YLEKLRDLGYRYDKLKNIVAIYKEIKELEKYEDYCRTILGIKRDEVISIYRAIAEDKQER
EKLREKLTKINSEIDKLKSELSNIVRENIDGENIDRILEVIDHHVERLLKEKMVKEAELK
LNRDSINIIRESTVCPLCGRELSLDLREKLSRDIDLRIEFLEKSLEEYNSIITKLKNLYE
RFRSLAKSRYELDGQLDQITRRLSNNIQKFKEIQEDLDNILSSVKGVDVFSTCFSSSIIS
TITCLQNKAKEIQDSLNEKRNLLHKLLKDVNADINTILEEFNNIVKELAGYGVNLDSFRY
SEIENEYRKISDELNRKISESERIRGFIESSEARKKELNEKIKNLDEELKELEKLVKIYP
SLDILVNRILGKDGLLAKLLTNEARMLIERYTNRILHELGMDFSITIDEDFNISVKTMFG
DIDVRGLSGGEQVALSIALRIALAYTVFGRLPGFFILDEPTQFLDSERRRTIFEIIKRLS
ERLPQVLVVTHDVEVVDMADKVYYISKEGGRSVVRERIEYIAEIT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactgttattgtgagaagggttagattaaggaatatactatctcatgagaat
acagatatagtttttccaatgggtttaatagcattggtaggtcctaacggtgcaggtaaa
agctctattgtggattccatagtatatgccatgtttgtttcaccaaagagtggcaggagc
tttaggggcgagggaaagaaggggattctaaggataggtacaagtgagggctcaatagaa
ctagagcttagtgtatctggaaaaatatatagaattcaacgtatcattagtgtatctaga
ccagaaactgcaaagatttctgaagttgatgaaaatggtaatgagagggttatagctgta
ggtgtagataatgttctagatgttattagaagtattttagggataccatcaagtgatgca
attagattaactgttgtttcaagacagaatgagctttctagacttatagaggaacagcca
tctagaagaaaagagcttatccttaggctactaggtttagaggaacttgagaaagctaaa
gatcttctcaaacaggctttagatggagctgagagagctaggataaggtttgatgaaata
agaaggatgattaacgatattactaatgagctatctagattggagaaagaagttagtgaa
aagagggagaggttagatagacttaacctagagataaatagtcttagagaaagattatca
tatcttgaaaaactaagagatttaggatatagatatgataaactgaagaatattgtagca
atatataaagagataaaagaattagagaaatatgaagattattgtaggactattctaggt
ataaaaagggatgaagtaatatctatttatagagctatagctgaagataaacaggagagg
gagaaactcagagagaaattaacgaagataaatagtgagatagataaactaaaatctgag
ttatcaaatattgttagagagaatatagatggggaaaatatagatagaattcttgaggta
atagatcaccatgttgaaaggctattaaaggaaaagatggttaaagaagcagagcttaaa
cttaatagggattcaattaatattattagggagagcactgtatgtcctctatgtggaaga
gagctctccttagaccttagggaaaaattgtcaagagatatagatcttcgtatagaattt
cttgaaaaatctttagaggagtacaatagtattattacaaagcttaagaatttgtatgaa
agatttaggtctttagctaaatctagatatgaactagatggtcagctagatcaaattaca
agacgattgtctaataatatacagaaatttaaggagattcaggaggatttagataatatt
cttagtagtgtaaagggtgttgatgtatttagtacttgttttagtagtagcattatatca
actattacatgcctacagaataaagcaaaggagatacaggattctttaaatgaaaagaga
aatcttttacataaactattaaaagatgttaatgctgatattaatactatactcgaagag
tttaacaatattgtaaaagagttggctggatatggagttaatttggatagttttagatat
agtgagatagagaatgagtatagaaagatttctgatgaactgaatagaaagataagtgag
agtgagaggatcagaggatttattgagagtagtgaagctaggaaaaaggaacttaatgaa
aagattaagaatcttgatgaagagcttaaggaactagagaagcttgtaaagatatatcca
tctctagatatactggtgaatagaatactaggtaaagatgggcttctagcaaagcttctt
acaaatgaagcgagaatgcttatagagagatatacaaataggattctacatgagcttgga
atggacttctctataactatagatgaagattttaatattagtgttaagaccatgtttgga
gatatagatgttagaggtctaagtggtggagaacaggtagctctctcaatagctctaaga
atagcacttgcatataccgtctttggtagacttccaggtttctttatattagatgaacct
acacagtttctcgatagtgaaagaagaagaactatatttgagatcataaagaggctgagt
gaaagattgccacaggtcttggttgttactcacgatgttgaggttgtagatatggctgat
aaggtatactatatatctaaagagggagggagatccgtagttagagaaagaattgaatat
atagctgaaataacataa
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