Ignisphaera aggregans: Igag_1376
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Entry
Igag_1376 CDS
T01307
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
iag
Ignisphaera aggregans
Brite
KEGG Orthology (KO) [BR:
iag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iag03016
]
Igag_1376
Enzymes [BR:
iag01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Igag_1376
Transfer RNA biogenesis [BR:
iag03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Igag_1376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
ADM28179
UniProt:
E0SQ48
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All DBs
Position
complement(1289113..1289670)
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AA seq
185 aa
AA seq
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MSSNNETNLNSKSVIMGQRILLRDHSIGNKLFKSFLGKPIGISKPSPMQEYVSPFILSTY
DSIYLCRKNIADLNLNLRCQELLEKLKHMDRRLWLRYRVYEYLRDRGYIVRSGIKFGTDF
SVYELGPGLEHAPYVVTVIDENADLTPIDIVRLGRVSHSVRKKSVLAIASDRGDITFLVF
KWIKL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaataatgaaacaaatttgaatagtaaatcagttattatgggtcagagaata
ttactgagagatcattctattggtaataaactctttaaatcctttctagggaagcccatt
ggtatttcaaagcctagtcctatgcaagaatatgtatcgccattcattttatctacatat
gattcaatatatctatgtagaaaaaatattgccgatcttaatctaaatctaaggtgtcag
gagttacttgaaaaacttaaacatatggatagaaggctttggctaagatatagagtgtat
gagtatttgagggatagaggatatatagttaggagtggtattaagtttggaactgatttt
agtgtatatgagcttggtcctggacttgaacatgcaccctatgtagtaacagtaattgat
gaaaatgctgatcttacccccatagatattgttagacttggtagagttagccatagtgta
agaaagaagtctgtattggctatagctagtgacagaggtgatataacctttctagttttt
aagtggattaagctctaa
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