KEGG   Ignavibacterium album: IALB_0068
Entry
IALB_0068         CDS       T01943                                 
Symbol
recQ
Name
(GenBank) Superfamily II DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ial  Ignavibacterium album
Pathway
ial03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ial00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IALB_0068 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ial03019]
    IALB_0068 (recQ)
   03400 DNA repair and recombination proteins [BR:ial03400]
    IALB_0068 (recQ)
Enzymes [BR:ial01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IALB_0068 (recQ)
Messenger RNA biogenesis [BR:ial03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     IALB_0068 (recQ)
DNA repair and recombination proteins [BR:ial03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      IALB_0068 (recQ)
SSDB
Motif
Pfam: DEAD Helicase_C Pribosyltran RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: AFH47782
UniProt: I0AFM5
LinkDB
Position
73614..75629
AA seq 671 aa
MTRQEAETILQRTFKLPKFYDEQWLTIDKILKGEKVLLIEKTGFGKSLCFQFPATVFNGT
TVIFSPLIALMRDQVKKLTALGISAKCINSEQTSEENTQIINEAKQGKIKILYIAPERQE
NSEWIEATRQMNLSMVVVDEAHCISVWGHDFRPTFKRIINLVKLLPKGLPVLATTATATK
RVELDVAQQIGNNISTIRGNLMRDNFKLFVVKVSSEDEKLIWLGKNLNNLPGSGILYTGT
RVDTEIYSKWFENLKISSTAYNAGLDADSRIAIENGLMSNKWKCIISTNALGMGIDKPDI
RFIIHTQIPQSPIHYYQEIGRAGRDGQPSYIILFYNPEDRKLPEAFIEGGRPAIKKYERV
INAVKSELLGERDLMKRTNLKQNQIRVIKADLIEQGIIREVMIGKSKKFEFVPNSQPLNT
EAFEELRNAKLADLENMIAYVETDKSRMKFLCDYLGDNSNHTFNNCDNTGEKKITVSVTS
EWTKKLQNFREDYFPELEVESKGLNIVNGVAASYYGVSNVGAALHRSKYEKGGDFPDFLL
KLVLKAYRKKFGQEKFDLILYVPPTSSGDLVRNFAVKISQVLKFPISHNLVKVRQTKEQK
VFENGYLKTDNVRGAFTFSTPNDIKGKSVLLIDDIFDSGATVKEIGRVLTNFGAVKIAPI
VIARTVGGDIV
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgacaagacaagaagcagaaacaattttacaacggactttcaaactcccgaagttctat
gacgaacaatggctgactattgacaaaatcctaaaaggcgaaaaggttctacttatcgaa
aagacaggttttggcaagtcactttgttttcaatttccagcgacagttttcaacggcaca
acagttatattttctcctttaatcgcattaatgcgtgaccaagtcaaaaagttgacagct
cttggcatttcagcaaagtgtattaatagtgaacagacatctgaagaaaacacacaaata
ataaatgaagctaaacagggcaaaataaaaatcctatacatagcacccgaaagacaagaa
aacagcgaatggattgaagctactcgacaaatgaacctatcaatggttgtagttgatgaa
gcacattgcatttcagtttggggacacgatttccgaccaacatttaaaagaataattaac
cttgtaaaattgcttcctaaaggactacctgttttagcaactactgcaacagccacaaaa
agagttgagcttgatgttgcccaacaaattggcaacaacatatcaacaattcgcgggaac
ttaatgcgtgacaatttcaaattatttgttgtcaaagtttcctctgaagatgaaaaatta
atttggcttggcaagaacttaaataatctcccaggttcaggaattctttacacaggaaca
agagttgataccgaaatttactccaaatggttcgagaatctaaaaatatcatctaccgcc
tacaatgcaggtttagatgcagattctagaattgcaatagaaaacggattaatgagcaat
aaatggaaatgtattatttcaactaacgcattgggaatggggatagacaagcccgacatt
cgatttattattcacactcaaattccacaatccccgattcactattatcaagaaattggc
agagcaggtagagatggacaaccttcatacatcattctgttttacaatcccgaagaccga
aaattgcctgaagcatttattgaaggtggaagaccagcgataaaaaaatatgaacgggtt
atcaatgccgtaaaatccgaattacttggtgagagagatttaatgaagcgaacgaacttg
aaacaaaatcaaattagagtaattaaagccgacttgattgagcaaggaataatccgtgaa
gtaatgattgggaaaagtaaaaaatttgaatttgtcccaaactctcaacctctaaacaca
gaagcatttgaagaattgagaaatgctaagttggcagaccttgaaaatatgattgcttat
gttgaaactgataaatcaaggatgaaattcttatgcgactatttaggcgataattctaat
cacaccttcaacaattgcgataatacaggagaaaagaaaattactgtatctgtaacgtct
gaatggacaaaaaaacttcaaaatttcagagaagattatttccctgaactagaagttgaa
tcaaaaggtttaaatatcgtaaacggagtagctgcatcctattatggcgtttcaaatgtt
ggtgcagcattgcaccgttcaaaatatgaaaaaggtggtgactttcctgattttttatta
aagttggttttaaaagcatatcgcaagaagtttggtcaagaaaaatttgacttgattctt
tatgttccacccacttcatcgggtgatttggtaagaaactttgcggttaaaatttcacaa
gtattaaagttcccaatctcccataatcttgtgaaagtaagacagaccaaagaacaaaaa
gtatttgagaatggctatctaaagacagacaacgtaagaggtgctttcacgttttcaact
ccgaatgacataaaaggaaagagtgttttgctaattgacgacatctttgatagtggtgca
acagtgaaagaaataggtagagtattaactaactttggagcagtaaaaattgcacctatt
gtaatcgcaagaacagtgggtggagacatcgtataa

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