Entry |
|
Symbol |
recQ
|
Name |
(GenBank) Superfamily II DNA helicase
|
KO |
|
Organism |
ial Ignavibacterium album
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ial00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IALB_0068 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ial03019]
IALB_0068 (recQ)
03400 DNA repair and recombination proteins [BR:ial03400]
IALB_0068 (recQ)
Enzymes [BR:ial01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IALB_0068 (recQ)
Messenger RNA biogenesis [BR:ial03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IALB_0068 (recQ)
DNA repair and recombination proteins [BR:ial03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IALB_0068 (recQ)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
73614..75629
|
AA seq |
671 aa
MTRQEAETILQRTFKLPKFYDEQWLTIDKILKGEKVLLIEKTGFGKSLCFQFPATVFNGT
TVIFSPLIALMRDQVKKLTALGISAKCINSEQTSEENTQIINEAKQGKIKILYIAPERQE
NSEWIEATRQMNLSMVVVDEAHCISVWGHDFRPTFKRIINLVKLLPKGLPVLATTATATK
RVELDVAQQIGNNISTIRGNLMRDNFKLFVVKVSSEDEKLIWLGKNLNNLPGSGILYTGT
RVDTEIYSKWFENLKISSTAYNAGLDADSRIAIENGLMSNKWKCIISTNALGMGIDKPDI
RFIIHTQIPQSPIHYYQEIGRAGRDGQPSYIILFYNPEDRKLPEAFIEGGRPAIKKYERV
INAVKSELLGERDLMKRTNLKQNQIRVIKADLIEQGIIREVMIGKSKKFEFVPNSQPLNT
EAFEELRNAKLADLENMIAYVETDKSRMKFLCDYLGDNSNHTFNNCDNTGEKKITVSVTS
EWTKKLQNFREDYFPELEVESKGLNIVNGVAASYYGVSNVGAALHRSKYEKGGDFPDFLL
KLVLKAYRKKFGQEKFDLILYVPPTSSGDLVRNFAVKISQVLKFPISHNLVKVRQTKEQK
VFENGYLKTDNVRGAFTFSTPNDIKGKSVLLIDDIFDSGATVKEIGRVLTNFGAVKIAPI
VIARTVGGDIV |
NT seq |
2016 nt +upstreamnt +downstreamnt
atgacaagacaagaagcagaaacaattttacaacggactttcaaactcccgaagttctat
gacgaacaatggctgactattgacaaaatcctaaaaggcgaaaaggttctacttatcgaa
aagacaggttttggcaagtcactttgttttcaatttccagcgacagttttcaacggcaca
acagttatattttctcctttaatcgcattaatgcgtgaccaagtcaaaaagttgacagct
cttggcatttcagcaaagtgtattaatagtgaacagacatctgaagaaaacacacaaata
ataaatgaagctaaacagggcaaaataaaaatcctatacatagcacccgaaagacaagaa
aacagcgaatggattgaagctactcgacaaatgaacctatcaatggttgtagttgatgaa
gcacattgcatttcagtttggggacacgatttccgaccaacatttaaaagaataattaac
cttgtaaaattgcttcctaaaggactacctgttttagcaactactgcaacagccacaaaa
agagttgagcttgatgttgcccaacaaattggcaacaacatatcaacaattcgcgggaac
ttaatgcgtgacaatttcaaattatttgttgtcaaagtttcctctgaagatgaaaaatta
atttggcttggcaagaacttaaataatctcccaggttcaggaattctttacacaggaaca
agagttgataccgaaatttactccaaatggttcgagaatctaaaaatatcatctaccgcc
tacaatgcaggtttagatgcagattctagaattgcaatagaaaacggattaatgagcaat
aaatggaaatgtattatttcaactaacgcattgggaatggggatagacaagcccgacatt
cgatttattattcacactcaaattccacaatccccgattcactattatcaagaaattggc
agagcaggtagagatggacaaccttcatacatcattctgttttacaatcccgaagaccga
aaattgcctgaagcatttattgaaggtggaagaccagcgataaaaaaatatgaacgggtt
atcaatgccgtaaaatccgaattacttggtgagagagatttaatgaagcgaacgaacttg
aaacaaaatcaaattagagtaattaaagccgacttgattgagcaaggaataatccgtgaa
gtaatgattgggaaaagtaaaaaatttgaatttgtcccaaactctcaacctctaaacaca
gaagcatttgaagaattgagaaatgctaagttggcagaccttgaaaatatgattgcttat
gttgaaactgataaatcaaggatgaaattcttatgcgactatttaggcgataattctaat
cacaccttcaacaattgcgataatacaggagaaaagaaaattactgtatctgtaacgtct
gaatggacaaaaaaacttcaaaatttcagagaagattatttccctgaactagaagttgaa
tcaaaaggtttaaatatcgtaaacggagtagctgcatcctattatggcgtttcaaatgtt
ggtgcagcattgcaccgttcaaaatatgaaaaaggtggtgactttcctgattttttatta
aagttggttttaaaagcatatcgcaagaagtttggtcaagaaaaatttgacttgattctt
tatgttccacccacttcatcgggtgatttggtaagaaactttgcggttaaaatttcacaa
gtattaaagttcccaatctcccataatcttgtgaaagtaagacagaccaaagaacaaaaa
gtatttgagaatggctatctaaagacagacaacgtaagaggtgctttcacgttttcaact
ccgaatgacataaaaggaaagagtgttttgctaattgacgacatctttgatagtggtgca
acagtgaaagaaataggtagagtattaactaactttggagcagtaaaaattgcacctatt
gtaatcgcaagaacagtgggtggagacatcgtataa |