Ignavibacterium album: IALB_0644
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Entry
IALB_0644 CDS
T01943
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ial
Ignavibacterium album
Pathway
ial03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ial00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IALB_0644 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ial03019
]
IALB_0644 (pnp)
03016 Transfer RNA biogenesis [BR:
ial03016
]
IALB_0644 (pnp)
Enzymes [BR:
ial01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IALB_0644 (pnp)
Messenger RNA biogenesis [BR:
ial03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IALB_0644 (pnp)
Transfer RNA biogenesis [BR:
ial03016
]
Prokaryotic type
tRNA degradation factors
IALB_0644 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_KhpA-B
PCB_OB
KH_2
OB_RRP5_4th
S1_2
RRM_DEAH11
HSR
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AFH48356
UniProt:
I0AH99
LinkDB
All DBs
Position
718214..720328
Genome browser
AA seq
704 aa
AA seq
DB search
MAIIKKEVEIGGKLFSIETGRYARQANGAVMVRYGDTMVLVTAVASEDVKDDQDFFPLQV
EYREKTSAAGKIPGGYIKREGRPTEKEILSARLCDRPIRPLFPKNFMNETQVIAMVLSYD
GENDADVLAACGASAALTISDIPFDGPMGEVRVGRVDGQFVINPTHQQLEVSDMELVVAG
TSDSIMMVEGEAKELSESEMLEALRFAQTEIRKIVELQLELQKEAGKQKWIVPEKVIDEN
LKNDVNELALEKLKSIVYSVLTKEERSAKNKELAEFVKTSLAEKYPEQEKVIAELLHDME
KELMRQRILTEGIRLDGRKTTDIRPITIETSLLPRTHGSALFTRGETQSLTTVTLGTKND
EQLVDGLLQEYTKKFMLHYNFPPFSVGEVGRLTGVSRREIGHGNLAERSLKQVFPAEDVF
PYTVRVISDILESNGSSSMATVCAGSLAMMDAGIPIKAAVSGIAMGLVKEGEQYAILSDI
LGNEDHLGDMDFKVAGTSKGITGLQMDIKIQGISFEIMEKALAQAKEGRMKILEIMNQAI
AEPRPHLSPYAPRLITMKIDTDQIGLVIGPGGKTIQGMQRLFGVEIVIDEDGTVNIASPN
RENAQKCKEYIKKLTATPEVGEVYEGVVTKIMDFGAFVEILPGKEGLLHISQIDNKRVNK
VSDYFKVGDKVLVKLMKIEDGKLSLSRKEVLNNSEENKQKEKQQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctattattaaaaaagaagttgaaattggcggtaagttattttcaattgaaacaggt
cgttatgcaagacaggcaaacggcgctgttatggttcgctacggagatacaatggtgctt
gttaccgctgttgcttctgaagatgtaaaagatgatcaggatttctttcctttacaggtt
gagtatcgtgaaaaaacttctgcagccgggaaaattccgggtggatatattaaaagagaa
ggaagaccaaccgaaaaggaaattcttagtgcaagactctgcgaccgtccgataagacca
ttgtttcctaaaaactttatgaatgaaactcaggttattgcaatggttttgtcttatgat
ggagaaaatgatgcagatgtacttgcagcttgcggtgcttcggcagcattaacaatctcc
gacatcccgtttgatggtcctatgggcgaagttcgggttggcagagttgatggacagttt
gtaattaatccaactcatcaacagcttgaagtaagtgatatggaacttgttgttgctggc
acaagcgattcgattatgatggttgaaggtgaagcaaaagaattaagtgaatctgaaatg
cttgaagctttgagatttgctcagactgaaatcaggaagattgttgaacttcaactcgag
cttcagaaagaagcaggaaaacaaaaatggattgttccagaaaaagtaattgatgaaaat
cttaaaaacgatgtcaatgaactcgcattagaaaaattaaaatcaattgtttattcagtt
cttaccaaagaagaacgctcagctaagaataaagaactcgctgagtttgttaagacttct
ttggctgaaaaatatcctgagcaggaaaaagttattgctgaactgcttcacgatatggaa
aaagagctgatgcgtcaacggattcttacggaaggaatcagactagatggaagaaaaaca
actgatataagaccaattacaattgaaacatcgttgcttccgagaactcacggctcagct
ttgttcacaagaggtgaaactcaaagcttaactactgtgacactcggaacaaaaaacgat
gaacagcttgttgatggtttacttcaggaatacacaaagaaattcatgttgcattataac
ttcccgccattttccgttggtgaagttggaagattaacgggcgtaagcagaagagagatt
ggtcacggtaatcttgctgaaagatctttgaaacaggttttccctgctgaagatgttttc
ccttacactgttcgtgttatttctgatatcctcgaatcaaatggttcatcttcaatggca
accgtttgtgctggttcgcttgcaatgatggatgcaggaattccaatcaaagctgctgtg
tccggaattgcaatgggtcttgttaaagaaggtgaacaatacgcaatcctgtctgacatt
ctcggaaatgaagatcatcttggtgatatggatttcaaagttgccggcacatcgaaggga
ataaccggacttcaaatggatatcaagattcagggaatatcttttgagataatggagaaa
gcattggcgcaggcaaaagaaggacgaatgaaaattcttgaaataatgaatcaggcaatt
gcagaacctcgtccacatttatcaccttatgcaccaagattaataacaatgaaaattgat
acagaccagattggattggttattggtcctggcggaaaaaccattcagggaatgcaaagg
ttattcggagttgaaattgtaattgatgaagacggaactgttaatattgcttctcccaac
agagagaatgcacagaaatgtaaagagtatatcaaaaagcttacagcaactcccgaagtc
ggcgaagtatatgaaggtgttgtaacaaagattatggatttcggtgcattcgtagaaata
ctgcctggtaaagaaggattgctgcacatctcgcaaattgataataaacgtgttaacaaa
gtaagtgactattttaaggttggtgataaagtacttgttaaactgatgaaaattgaagat
ggtaaattatctttaagtcgtaaagaagtgcttaacaattctgaagaaaacaaacaaaaa
gagaaacaacaataa
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