Ignavibacterium album: IALB_1138
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Entry
IALB_1138 CDS
T01943
Name
(GenBank) Superfamily II DNA/RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ial
Ignavibacterium album
Pathway
ial03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ial00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IALB_1138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ial03019
]
IALB_1138
03009 Ribosome biogenesis [BR:
ial03009
]
IALB_1138
Enzymes [BR:
ial01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IALB_1138
Messenger RNA biogenesis [BR:
ial03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IALB_1138
Ribosome biogenesis [BR:
ial03009
]
Prokaryotic type
rRNA helicases
IALB_1138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFH48849
UniProt:
I0AIP2
LinkDB
All DBs
Position
1280263..1281966
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AA seq
567 aa
AA seq
DB search
MKTFEELGLEHSIVTAIKELGFENPMTVQEKVIPVLLEDKENDVIALAQTGTGKTAAYGL
PIIQKVNTKKSYTQYLILSPTRELCLQIADDLSDFAKYKSDVKIAAVFGGSSIERQIQLV
RSGAHIISATPGRLIDLLKRKVVDLSKVNTIILDEADEMLNMGFRDDLEEILKSTTDNKN
TLLFSATMSSEIRSIANKFMFEPVEITIGKKNVGAENIKHICYTVNAKDRYLTLKRIVDY
YPEIYGIIFCRTKRETQDVADLLLKDGYNAEALHGDLSQAQRETVMNKFRQRNIQLLIAT
DVAARGLDVDGLTHVINYNLPDELEIYTHRSGRTGRAGKTGTSIVITNLKEKSKLRTIEN
QTNKKFEHHKVPSGNEICARQLFHLVDRVEKVEVDDSKIQSFLPEIMKKLDWCDREELIK
KFVSVEFNRFLSYYSNLRDIETPIESIKYKSGNSSNFNFKRFFINLGQLDELKPKTLIDM
INDFTGINNIEIGEIEILKTFSFFEVDSEYADKILFAFKDKYSGKRKISVEVSEGRTKNR
SKKFFRAKGGNSRKDYRRKSFQKSYSK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcgaagagctcggattagagcatagtatagttactgctataaaagaactg
ggatttgaaaatccaatgactgttcaggaaaaagttattcctgttttacttgaggataag
gaaaatgatgtaattgctttagctcaaacaggcaccggaaaaactgcagcttacggatta
ccaattattcagaaagtaaatactaaaaaatcatacacacaatatttaattctttctccc
actagagagctatgtcttcagattgcagatgatctttccgatttcgctaagtacaaaagc
gatgtaaagattgctgcagtatttggtggttcgagtattgaaaggcaaattcaacttgtg
agaagtggtgctcacataatttctgcaacaccgggacgcttaatcgatttactgaaaagg
aaagttgttgatctttcaaaagttaatacaataattcttgatgaagcagatgaaatgttg
aatatgggattcagagatgatctggaagaaattctcaaatcaactacggataacaaaaac
actttacttttttctgcaacaatgtcatctgaaattcgttcaattgcaaacaaatttatg
tttgagcctgttgaaataaccataggaaagaaaaatgtcggtgcagaaaacatcaaacat
atatgttatacagtcaatgcaaaggatcgttatctcacattgaaaagaattgttgattat
tatcccgagatttatggaattatcttttgccgaactaagcgcgaaactcaggatgttgct
gatcttttattgaaagatggttacaatgctgaagctttgcacggcgatttatctcaggca
caaagagaaactgttatgaataaattcaggcaaagaaacattcagctacttatagcaact
gatgttgcagctcgcggattggatgttgatggtttaacgcatgtgataaattataatttg
ccggatgaactggaaatctatactcacagaagcggcagaaccggaagagcaggaaaaaca
ggaacttcaattgttattactaatctgaaagaaaaatcaaaacttagaacaattgaaaat
cagaccaacaaaaaatttgaacaccataaagttccatcaggcaatgaaatttgcgcacga
cagttatttcatcttgttgacagagttgaaaaagtggaagttgatgattcaaagattcaa
tcttttcttcctgaaataatgaaaaaacttgactggtgtgatagggaagagttaatcaaa
aaatttgtttcagtcgagttcaacagatttctgagttactacagcaatttaagggatatt
gaaactcccattgaatcaataaaatataaatcgggcaactcatcaaattttaactttaag
agattttttatcaatttagggcaacttgatgaactgaaacctaaaactcttatcgatatg
ataaatgattttaccggaataaataatattgaaataggtgaaattgagattctgaaaaca
ttttccttttttgaagttgattcagaatatgctgataaaattttatttgcatttaaagat
aaatattctgggaaaagaaaaatttccgttgaggtttcggaaggaagaactaaaaaccga
agcaaaaaattcttcagagcaaaaggaggcaattctaggaaagattaccgcagaaaaagt
tttcagaaaagctatagcaaataa
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