Ignavibacterium album: IALB_1274
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Entry
IALB_1274 CDS
T01943
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ial
Ignavibacterium album
Pathway
ial03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ial00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IALB_1274 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ial03019
]
IALB_1274 (recQ)
03400 DNA repair and recombination proteins [BR:
ial03400
]
IALB_1274 (recQ)
Enzymes [BR:
ial01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IALB_1274 (recQ)
Messenger RNA biogenesis [BR:
ial03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IALB_1274 (recQ)
DNA repair and recombination proteins [BR:
ial03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IALB_1274 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
HTH_34
NPL4
Xpo1
Motif
Other DBs
NCBI-ProteinID:
AFH48984
UniProt:
I0AJ27
LinkDB
All DBs
Position
complement(1448855..1451203)
Genome browser
AA seq
782 aa
AA seq
DB search
MKEALQILKEFFGYDSFRPAQEEVISEILKGENVIAVLPTGAGKSVCYQIPALISDNYSI
VISPLIALMKDQVDSLNRKKVVAAFINSTLEWVEIEKILNDISFGKIKLLYIAPERLESK
EFSERLKAMRPSSLFIDEAHCISEWGHNFRPSYTKIKDFIQFTDIKKVSAFTATATPEVV
NDIIKQLDIKKAKVIVKGFERENISISVYQTSKKKEKLLEIIKTNQHPAIIYVSSRKKAE
SINEFLNLNKTKSEFYHAGLNNILRRNIQEEFIAGKVPIIIATNAFGMGIDKKDIRTVIH
YDIPGSIENYYQEIGRAGRDGKPSSAILLFDEKDLSIHKYFIDSAYPKKELIQQIYNGIC
DYAQIAIGSIPDKNIPINSDFINLYTKQNISSGLLHSALTYLETAGYIKINSSLTSHDSI
KFLIDPNKLKQFLKTTENDELKDLILFLVRNFGSRIFDDRTPIDYHFIESNTGLSTEAQK
DLYNFLSDIGFAEFISLDGKETVTLLQPRVQKEYLKLNYKLINELYLFAHEKLEKMRAFV
YTNECRFKYILNYFGQNTSDYACGKCDKCSSQNHQLEKINFLSEPIEEVELPFDNYDKNL
ELFHRLNEVRKTAAKKFMQTPNLICPDSVLAKISQLKPDNKYKLMMIEGFTTRMFNKVGN
DFIEAIQSYLKEDKNDSEKSLPQNVQETLQLLKKNFSLKEIASIRKLDEAVISMQIETIL
SYYPEIEIRSILSEEDLKVIETAMSAGYENLRDLKDKLNGKYSVPLLRIAIAKIKFRSST
NH
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagctctgcaaatattaaaagaattttttggttatgattctttcagacctgca
caggaagaagtaatttcagaaattttgaaaggtgaaaatgtaatcgcagttttaccaaca
ggtgcaggaaaatcagtttgttatcaaatcccggctttaatttcagacaactattctatc
gttatctcaccactaattgcattgatgaaagatcaggtagattctcttaatagaaaaaaa
gtagttgctgcttttataaatagtacacttgaatgggttgaaatcgaaaaaattcttaat
gatatatcttttggtaaaattaaacttctttacattgcacccgaaagacttgaatctaaa
gaattttctgaacggctgaaagctatgaggccatcttcccttttcattgatgaagcacat
tgcataagcgaatggggacataatttcagaccgagctacacaaaaattaaagactttatt
cagtttactgacattaaaaaggtttcagcatttactgcaacagcaacacctgaagtagta
aacgatataatcaaacaacttgatattaaaaaagcgaaagtaattgtaaaaggttttgaa
agagaaaatatttctatcagtgtttatcagaccagtaagaaaaaggaaaaattacttgag
ataattaaaactaatcagcaccctgcaataatttatgtttcttcaagaaagaaagctgaa
agcattaatgaatttctgaatctgaataaaacaaaatcagaattttatcatgccggatta
aataatattttaagaagaaatattcaggaagaatttattgcaggcaaagttccgattatt
atagcaacaaatgctttcggaatgggcatcgataaaaaagatataagaactgtaattcat
tatgatattccaggttcaattgaaaattattatcaagaaatcggaagagcaggaagagat
ggaaaaccatcttcagcaattctattgttcgatgaaaaggatttatcaattcataaatat
ttcattgactcagcttatcccaagaaggaattgattcagcagatttataatggcatctgc
gattatgctcaaatagctatcggttcgattccggataaaaacattccaatcaactctgat
tttataaatctttacactaaacaaaatatttcttcaggacttttacactcagcccttact
tatcttgaaacagccggttatataaaaattaactcaagtttgacttctcacgactcgata
aaatttttaatcgatccaaacaaactgaaacaatttctaaagacaactgaaaatgatgaa
ttaaaagatctgatattgtttcttgtaagaaatttcggaagcagaattttcgatgataga
actccgattgattatcattttattgaaagcaataccggtctttcaacggaagctcagaaa
gatttatataactttcttagtgatataggtttcgctgagtttatctcacttgatggaaaa
gaaactgtaacacttcttcaacccagagtacaaaaagaatatcttaaattaaattacaag
cttataaatgaactgtatttattcgctcacgaaaaacttgagaagatgagagctttcgtt
tatacgaatgaatgcagatttaaatacatattgaattattttggtcagaatacttcagat
tatgcctgtgggaaatgtgataaatgcagctctcaaaatcatcagttagaaaaaattaac
tttttatctgagcccattgaagaagttgaattaccttttgataattatgataaaaatctc
gaactatttcatcggcttaatgaagtcagaaagacagcagcaaaaaaatttatgcaaacg
ccaaatttaatttgtcctgatagtgttcttgcaaaaatttcacagcttaagccggacaat
aaatataaactgatgatgattgaaggatttacgacaagaatgtttaataaagtcggtaat
gattttattgaagccattcaatcctatcttaaagaagataaaaatgattctgagaaatcg
cttccacaaaatgttcaggagactttgcaactgctgaagaaaaatttttcactgaaagaa
attgccagcataaggaaacttgatgaagcagttatctctatgcagattgaaacaatactt
agttactatcctgaaattgaaattcgctcaattcttagtgaagaagatttgaaagttatt
gaaactgctatgagtgcaggttatgaaaatctgagagacttaaaagataaactgaatgga
aaatattctgtgcctttacttcggattgcaatcgccaaaattaaatttcgctcttcgacg
aatcattag
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