Iamia sp. SCSIO 61187: HC251_01695
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Entry
HC251_01695 CDS
T07394
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03420
Nucleotide excision repair
iam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HC251_01695 (pcrA)
03430 Mismatch repair
HC251_01695 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_01695 (pcrA)
Enzymes [BR:
iam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC251_01695 (pcrA)
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC251_01695 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HC251_01695 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DUF3553
DUF8079
Motif
Other DBs
NCBI-ProteinID:
QYG91274
LinkDB
All DBs
Position
356598..358904
Genome browser
AA seq
768 aa
AA seq
DB search
MPSGTRDDDEMELLRGLNPAQADAVTHVEGPLLVLAGAGSGKTRVLTHRIAHLIRDEGVS
PFAILAITFTNKAADEMKHRVEGLVGPVAQKMWVSTFHSACVRILRREAPRLGYPSSFTI
YDMADAQRLMGYVIRDLDMDPKRFSARSVYAQISAAKNKGLDVETYADQASNPFERRFAE
AYRDYQGRLRKAGAMDFDDLLGVTVEVLKAFPDALAHYQQRFQHILVDEYQDTNPVQNEL
ILLLASDHRNVMVVGDGDQSIYAFRGADISNILDFEKAFPEVTTVLLEQNYRSTQTVLDA
ANAVIANNVGRKPKELWTDQGKGDLISRYHADDEADEAQWVTGRMSALHDQGYRWGDIAV
FYRTNAQSRVLEEALARGSIPYKVLGGTRFYDRREIKDAVAYLKAVANPADEVSVKRVVN
TPKRGVGDASVARLDAWAASQGVTFLDAMRRADEAGIGGRAVNGIVSFLAVIDEAADVRD
EGPARMLEVLLDKSGYVAELRAEHSIEAEGRIENLAELVGAAQEVEDVDAFLESISLVSD
TDALDPDESQVVLMTLHSAKGLEFPIVFVIGMEDGVFPHIRALTEPAELEEERRLAYVGI
TRARELLHLSHAWARTMFGATQYNPPSRFLEEIPSELVTEIQGRRRSSRGGGSWGGRRSE
GEGYGSSSWGGRGRPERDGRDGMSPARARREAARQMQVDAAIEAGQSAAPSPAATHGIRI
GDDVRHAKWGEGVVLDLQGHGDKTEITVRFPSEGEKVLLLAWAPITKA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggggacccgtgacgacgacgagatggagctgctgcgggggctcaacccggcg
caggccgacgccgtcacccacgtcgagggtcccctcctcgtgctggccggcgccggctcg
ggcaagacccgggtcctgacccaccgcatcgcccacctgatccgcgacgaaggcgtgtcc
ccgttcgccatcttggccatcaccttcaccaacaaggcggccgacgagatgaagcaccga
gtggaggggctcgtcggccccgtcgcccagaagatgtgggtgtccacgttccactcggcg
tgcgtgcgcatcctccggcgcgaggccccccgcctggggtacccgtcgagcttcaccatc
tacgacatggccgacgcccagcggctgatgggctacgtcatccgggacctggacatggac
cccaagcggttctcggcccggtcggtctacgcccagatctcggcggccaagaacaagggc
ctcgacgtcgagacctacgcggaccaggcgtcgaacccgttcgagcggcgcttcgccgag
gcctaccgcgactaccagggccggctgcgcaaggccggcgccatggacttcgacgacctc
ctcggcgtcaccgtggaggtgctcaaggcgttccccgacgccctcgcccactaccagcag
cgcttccagcacatcctcgtcgacgagtaccaggacacgaacccggtccagaacgagctg
atcctcctcctggcctccgaccaccgcaacgtcatggtggtcggggacggggatcagtcg
atctacgccttccgcggcgccgacatctcgaacatcctcgacttcgagaaggcgttcccc
gaggtcacgacggtgctgctggagcagaactaccggtcgacccagacggtgctcgacgcc
gccaacgccgtcatcgccaacaacgtcggccgcaagcccaaggagctctggaccgatcag
ggcaagggcgacctgatctcccgctaccacgccgacgacgaggccgacgaggcccagtgg
gtcacggggcggatgtcggccctgcacgaccagggctaccgctggggtgacatcgccgtc
ttctaccggaccaacgcccagagccgcgtgctcgaggaggccctggcccgcgggtccatc
ccctacaaggtcctgggcggcacccggttctacgaccggcgcgagatcaaggacgccgtg
gcctacctgaaggccgtcgccaacccggccgacgaggtgtcggtcaagcgggtcgtgaac
acgcccaagcggggcgtgggcgacgcctccgtcgcccggctcgacgcctgggccgccagc
cagggggtgaccttcctcgacgccatgcgccgggccgacgaggcgggcatcggcggccgg
gccgtgaacggcatcgtcagcttcctggccgtcatcgacgaggccgccgacgtccgcgac
gagggtccggcccggatgctcgaggtcctcctcgacaagagcggctacgtcgccgagctc
cgggccgagcactccatcgaggccgaggggcggatcgagaacctggccgagctggtcggc
gccgcccaggaggtcgaggacgtcgacgccttcctcgagtcgatcagcctggtgtccgac
accgacgccctcgaccccgacgagtcccaggtcgtgctgatgacgctgcactcggccaag
ggcctggagttcccgatcgtgttcgtgatcgggatggaggacggcgtcttcccccacatc
cgggccctgaccgagccggccgagctggaggaggagcgccgcctcgcctacgtcggcatc
acccgggcgcgcgagctgctccacctcagccacgcctgggcccgcaccatgttcggggcc
acccagtacaacccgcccagccgcttcctggaggagatccccagcgagctggtcaccgag
atccagggccggcggcgctcgtcgcggggcggcgggagctggggcgggcggcgcagcgag
ggggaggggtacgggtcgagctcctggggcgggcggggccggcccgagcgcgacgggcgc
gacgggatgagcccggcccgggcccggcgcgaggcggcccggcagatgcaggtcgacgcc
gccatcgaggccggccagagcgcggccccgtcgccggcggccacccacggcatccgcatc
ggcgacgacgtccggcacgccaagtggggcgagggcgtcgtcctcgacctgcagggccac
ggcgacaagaccgagatcacggtccgcttccccagcgagggcgagaaggtcctcctgctg
gcgtgggcgcccatcaccaaggcctga
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