Iamia sp. SCSIO 61187: HC251_02585
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Entry
HC251_02585 CDS
T07394
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
iam
Iamia sp. SCSIO 61187
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QYG91430
LinkDB
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Position
complement(553521..556829)
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AA seq
1102 aa
AA seq
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MPSITVTPVPYGRGALVALRDAVADAKAGDPLAPVTVVVPSNHVGVTARRLLASDVLGPV
TRAGRGVAAVDFLTVFRLAELLGAATIAATGRRPVSIPSLSAAVRQVLGTDPGLFAPVAD
HPATEAALVASYRELRDLPDAALSSIARTGPRAAEVVRVHRAARQVLAAHWSDEEDLMAA
AADRVGGDPGAAEALGPVVLHLPQLLTLHAAALVRTVAERQQVRVLAGTTGDPRADADVV
TTLARLGVPVPAPDGLPRAGVGIVGPTVAPDRTQVASASDADDEVRHAVRRVVAAARAGT
PLDRIAVLHPTADPYARLLHEHLAAAGVAVNGPSPVPLASRAAGRTLIGLLALPEQGWRR
QAVLDWLGTAPLRFEGRPVPVAAWERLSREAGVVAGRDQWDARLLAEAARRDERAEQAVA
DDDAAAAARNRRRADHARSLRAFVTGLADDLERAGRRPRTWSQHARWARALLDRLLGPAA
QREDWPGDEVERRAAERVELAIDRLAVLDEVEGPVGLDVVVRTLEVELESDTGRVGRFGD
GVLVGPLTMGVGLDLDLVVVVGLAEGLAPRPPRDDSLLPDTERRAVDGLLPLRRDGVARQ
HRHLLAATAAADRQVLCFPRGDLRGGRDRVPSRWLLDLAGHLSGGRLWGDDLPALDVPWL
EHIHSFDHAVRTFDQPATPQEHRLRSLLAAGAGPRALGPATALGDPVIARGAELIAGRAS
SRLTRFDGNLGGLPVASPADPESGRVASATGLERWARCPFDYFVRSVLGIREVENPEDSL
SISALDRGSLVHKALEDFLLEVLARPERARPGPTDPWTAADRLRLREIGAALCAEYEAVG
LTGRALFWGRDRARILADLDATLTFDEEVRRLNGGRHLHAELGFGLGDEDLPPVALPLPD
GRAVRFRGQIDRIDRTEAGGLVVADYKTGGTSAYQGLSERNPDQGGTHLQLAVYGAAARA
AVGDPEAEVRSEYWFVSSKGRFSTKGYVLTPEISERISETLGLIVEGIEAGLFPAHPTDH
QGQPWNPCWSCDPDFLGVADLRRAWEAKGADPAMAGYLALIDPDRRSEPDPDEVDPADVG
AGPPDAGAAAASARARITEGAG
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgatcaccgtcacccccgtcccgtacggacggggcgcgctcgtcgccctgcgc
gacgcggtggccgacgccaaggcgggcgaccccctcgccccggtcaccgtcgtcgtcccg
tccaaccacgtgggcgtcaccgcccgccgcctcctcgcatccgacgtcctcggccccgtg
acgcgggccggccgcggggtcgccgccgtcgacttcctcaccgtcttccgcctggccgag
ctcctcggtgccgccaccatcgccgccaccggccgccggcccgtgtcgatcccgtccctc
tcggccgccgtccggcaggtgctgggcaccgacccgggcctgttcgcacccgtggccgac
caccccgccaccgaggcggcgctggtggccagctaccgcgagctgcgcgacctccccgat
gccgccctgtcgtcgatcgcccgcaccgggccgcgcgccgccgaggtggtgcgggtccac
cgcgccgcccggcaggtcctcgccgcccactggtccgacgaggaggacctcatggcggcg
gcggccgaccgggtgggcggcgacccgggtgccgccgaggcgttgggaccggtcgtgctc
cacctgccccagctgctgacgctccacgccgccgccctggtccgcaccgtggccgagcgc
cagcaggtgcgcgtgctggccggcaccaccggcgacccccgcgccgacgccgacgtcgtc
accaccctcgcccgcctcggggtgcccgtgccggccccggacggccttccgcgcgctggg
gtcggcatcgtcggccccaccgtggctcccgaccgcacgcaggtcgccagcgcctccgac
gccgacgacgaggtgcgccacgccgtgcgccgggtcgtcgccgcggcacgggccggcacc
ccgctcgaccgcatcgccgtcctgcaccccaccgccgacccctacgcccgcctcctccac
gagcacctggccgcggccggggtcgccgtcaacggcccctccccggtgcccctcgcctcc
cgcgccgcgggccgcaccctcatcgggctgctggccctgccggagcagggctggcgccgc
caggcggtcctcgactggctgggcaccgcccccctccggttcgaggggcgcccggtcccg
gtcgccgcctgggagcggctgtcgcgcgaggcgggggtggtcgccggtcgggaccagtgg
gacgcacgcctgctcgccgaggcggcgcgccgcgacgagcgggcggagcaggccgtcgcc
gacgacgacgccgccgccgcggcccgcaaccgccgccgggcggatcacgcccgcagcctg
cgggccttcgtgacgggcctggccgacgacctcgagcgggccgggcgccggccccggacc
tggtcccagcacgcccgctgggcccgggccctgctcgaccgcctgctcggcccggcggcg
cagcgggaggactggcccggcgacgaggtcgagcgccgggccgccgagcgggtcgagctg
gccatcgaccgcctcgccgtcctcgacgaggtcgagggtccggtgggtctcgacgtggtc
gtccggaccctggaggtcgagctcgagtccgacaccgggcgcgtcgggcgcttcggcgac
ggcgtgctcgtcggccccctcaccatgggggtcggcctcgacctcgacctggtcgtggtg
gtggggctggccgaggggctggccccccgcccaccgcgcgacgactccctgctccccgac
accgagcgtcgggccgtcgacgggctcctgcccctgcggcgcgacggcgtcgcccgccag
caccgccacctcctggccgcgaccgccgccgccgaccgccaggtcctgtgcttcccgcgc
ggcgacctccggggtgggcgggaccgggtgccgtcccgctggttgctcgacctggccggg
cacctctccggtgggcgcctctggggcgacgacctcccggccctcgacgttccgtggctc
gagcacatccacagcttcgaccacgccgtgcgcaccttcgaccaaccggccacaccgcag
gagcaccggctgcgctcgctcctcgccgccggcgccgggcctcgggcgctggggccggcc
acggcgctgggcgaccccgtcatcgctcgcggcgccgagctgatcgccggccgggcctcg
tcccgcttgacccgcttcgacggcaacctcggcggcctccccgtcgcctcgcccgccgac
cccgagagcggacgggtcgcctcggccaccggcctcgaacgatgggcccgctgccccttc
gactacttcgtccgctccgtcctcggcatccgcgaggtggagaaccccgaggactcgctc
agcatctcggcgctggaccggggcagcctcgtccacaaggcgctcgaggacttcctcctc
gaggtgctggcccgccccgagcgggcccgtcccgggccgaccgacccgtggacggcggcg
gaccggctccggctccgggagatcggggccgcgctgtgcgccgagtacgaggctgtcggc
ctcaccggtcgggccctgttctggggccgggaccgcgcccggatcctggccgacctggac
gccacgctcaccttcgacgaggaggtgagacggctcaacggcggtcggcacctccacgcc
gagctcggcttcgggctgggcgacgaggacctcccgccggtggccctgccgctgcccgac
ggccgcgccgtgcggttccggggccagatcgaccgcatcgaccgcaccgaggcgggcggt
ctcgtcgtcgccgactacaagacgggcgggaccagcgcctaccagggtctgtcggagcgc
aacccggaccagggcgggacccacctccagctggccgtgtacggcgccgcggcccgcgcc
gcggtcggcgatcccgaggccgaggtccgctccgagtactggttcgtctcctccaagggg
cgcttcagcaccaagggctacgtcctcaccccggagatctccgagcgcatctccgagacc
ctgggcctcatcgtcgagggcatcgaggccggtctgttcccggcccaccccaccgaccac
cagggccagccctggaacccgtgctggagctgcgaccccgacttcctcggggtggccgac
ctgcgccgggcgtgggaggccaagggggccgacccggcgatggccggctacctcgccctc
atcgaccccgaccggcggtccgagcccgaccccgacgaggtcgacccggccgacgtcggc
gccgggccgcccgacgccggggcggcggcggccagcgcccgggcccgcatcaccgagggg
gcgggctga
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