Iamia sp. SCSIO 61187: HC251_03800
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Entry
HC251_03800 CDS
T07394
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
iam
Iamia sp. SCSIO 61187
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iam03032
]
HC251_03800
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_03800
Enzymes [BR:
iam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HC251_03800
DNA replication proteins [BR:
iam03032
]
Prokaryotic type
DNA Topoisomerases
HC251_03800
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HC251_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYG91647
LinkDB
All DBs
Position
complement(790501..791532)
Genome browser
AA seq
343 aa
AA seq
DB search
MSVVGLDPAEDPEAVAESAGLTYVTDQAPGHRRVRRGRGFSYVDRRGNVLPAAEKDRIRS
LAIPPAWTDVWISPDPNAHLLATGRDAKGRKVYRYHDRWREVRDAAKYERLADFADALPD
LRRAVDADLSRRGLPPEKVTALVVRLLDETLIRVGNERYAEDNESFGLTTLRPDHVEVDG
GTIELDFVGKSGVAQRLSLHDARLARIAKRCHELPGKHLFSFLDDDGEVGHVSSAEVNEY
LRARMGDGVSAKDFRTWGGTSVAAGTLAHPCADDQPCDKLVIRAFEEAADVLGNTPTVCR
TCYVHPVVPDGYRSGALAETWKASRSTAAMSRSERTVRNLLDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgtcgggctcgacccggccgaggaccccgaggcggtggccgagtccgccggc
ctcacctacgtcaccgaccaggcccccggccaccgccgcgtccggcggggccgggggttc
tcctacgtcgaccggcggggcaacgtgctgcccgccgccgagaaggaccggatccggtcg
ctcgccatcccgccggcgtggaccgacgtgtggatcagccccgacccgaacgcccacctc
ctggccacgggccgggacgccaagggtcgcaaggtctaccggtaccacgaccgctggagg
gaggtccgcgacgcggccaagtacgagcggctggccgacttcgccgacgccctgcccgac
ctgcggcgcgccgtcgacgccgacctctcccgccgcgggctgccgcccgagaaggtcacg
gccctggtggtccggctcctcgacgagacgctcatccgggtcggcaacgagcgctacgcc
gaggacaacgagagcttcgggctgaccaccctcaggccggaccacgtcgaggtcgacggg
gggacgatcgagctcgacttcgtcggcaagtcgggcgtggcccagcgcctcagcctccac
gacgcccggctggcgcgcatcgccaagcgctgccacgagctccccgggaagcacctcttc
tccttcctggacgacgacggcgaggtcgggcacgtctcctcggccgaggtcaacgagtac
ctgcgggcccggatgggcgacggggtgagcgccaaggacttccggacctggggcggcacc
agcgtcgccgccggcaccctcgcccacccctgcgccgacgaccagccctgcgacaagctc
gtgatccgcgccttcgaggaggcggccgacgtgctgggcaacacgcccaccgtctgccgc
acgtgctacgtccaccccgtcgtgcccgacgggtaccggtccggtgccctcgccgagacg
tggaaggcgtcgcgctcgaccgcggccatgagccgctcggagcgcacggtccggaacctg
ctggacggctga
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