Iamia sp. SCSIO 61187: HC251_03815
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Entry
HC251_03815 CDS
T07394
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
iam
Iamia sp. SCSIO 61187
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iam03021
]
HC251_03815
Transcription machinery [BR:
iam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HC251_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Tnp_4
UPF0122
HTH_3
HTH_28
MarR
GerE
MarR_2
YdaS_toxin
IF2_N
Hydro_N_hd
HTH_36
HTH_29
FliT
Motif
Other DBs
NCBI-ProteinID:
QYG91650
LinkDB
All DBs
Position
complement(792561..793526)
Genome browser
AA seq
321 aa
AA seq
DB search
MTGSAGAGSAPTSVIDELADGLHRAGEATAESKRVATRSRTCRRRVRRTLDQVTDVVDVL
QARRTVPRGDDARDWSRRPGVPLEVWILHVRYARSGSSEDLGALVAEYEQYALSLSRRLR
RDREPSDDLDQVARESLVVALQRFDCERGLPFPAFATPTILGALRRHYRDHGWSIRVPRR
VHELAVPAREAADRLTTELGRSPKAHEIAEELGIETKDLLETQQAAAARTPSSLDSTPTV
DGPSQHEVVGDTDRNLLVAEDQLVLDQAIELLGDRDRDVIRLYFFDELTQSQIAERYGVS
QMQVSRWIASIVKRLRSHMEA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggctccgccggcgccggatcggcgcccacctccgtcatcgacgagctggccgac
ggcctccatcgggcaggtgaggcgacggccgagagcaagcgggtggccacccgcagccgg
acctgccgccgtcgcgtgcgccgcacgctggaccaggtcaccgacgtggtcgacgtcctg
caggcccgtcggacggtcccccgcggcgacgacgcccgggactggagccggcgccccggc
gtcccgctcgaggtgtggatcctgcacgtgcgctacgcccgctcgggcagctcggaggac
ctgggcgccctcgtcgccgagtacgagcagtacgccctgtcgctgtcgcggcggctgcgg
cgcgaccgcgagccgagcgacgacctcgaccaggtggcgcgcgagtcgctggtcgtcgcc
cttcagcggttcgactgcgagcgggggctgccgttcccggccttcgccaccccgacgatc
ttgggcgccctccgccgccactaccgcgaccacggctggagcatccgggtgccccggcgg
gtccacgagctggccgtgccggcgcgcgaagccgccgaccgcctcaccaccgagctgggc
cggtcgcccaaggcccacgagatcgccgaggagctcgggatcgagaccaaggacctgctc
gagacccagcaggcggccgcggcccggacgccgtcgtcgctcgactccacgccgaccgtc
gacggcccgagccagcacgaggtcgtcggcgacaccgaccgcaacctgctcgtggccgag
gaccagctggtgctcgaccaggccatcgagctgctgggcgaccgcgaccgggacgtgatc
cgcctgtacttcttcgacgagctgacgcagtcgcagatcgccgagcgctacggcgtgagc
cagatgcaggtgtcgcggtggatcgccagcatcgtcaagcggctccgcagccacatggag
gcctga
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