Iamia sp. SCSIO 61187: HC251_09335
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Entry
HC251_09335 CDS
T07394
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03420
Nucleotide excision repair
iam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HC251_09335
03430 Mismatch repair
HC251_09335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_09335
Enzymes [BR:
iam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC251_09335
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC251_09335
MMR (mismatch excision repair)
Other MMR factors
HC251_09335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Phage_P2_GpE
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYG92620
LinkDB
All DBs
Position
complement(1935864..1937840)
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AA seq
658 aa
AA seq
DB search
METARLLADLDPDQRRAVTETTHPLCIIAGAGSGKTRVLTRRIAYRVAVGTADPRHVLAL
TFTRKAATEMGTRLARMGLRDRPHVGTLHAMAWAQVRIWSHDRGTTLPSLLQHKGHLLRE
LPGRGHLPVPELASEIEWAGARDISADDYPSAAHQEDRRVSAPFEQVASLIVEYREAKRR
RGVMDFDDILRTCADLFDEEPGFARTQRWRFRHLFVDEYQDVNPLQHRLLSGWLGDRTDL
CVVGDPHQAIYRWNGADAGYLLRFAQDHEGAAVVELRGNYRSTPQILHLAGAVLGPGAAR
PLARRPAGDPPVLVAYGDEHEEARGVARAARTLHGPGTRWDSQAVLVRTNGQMKPFEDAF
TRARIPFRVRTAEPLAGRADIGAALRHVAPGDGHPLRTVVVDLDDYVAEQQAARGRDGQR
SEALEALVRLAREYSAMEPEATVGDLRGWLMTAMGLDGPGGVDAVHLVTFHAAKGLEWPV
VHIAGLEEGFVPVSYAKTPEAEAEERRLLHVAITRAEQTLRISWASTRTMRDAPVARRPS
RYVDALAAAKADLDALMTMDPGEGLARSRDALRTAVADDLDRALLDELHAWRARVARRAG
IAPAVVASDRVLGDVARHRPTDRAALGAILGVGPMVVDTHGDDLLGIVSAHAAAAGAP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggagacggcgcgcctgctcgccgacctcgaccccgaccagcggcgggccgtcaccgag
acgacccaccccttgtgcatcatcgccggcgccgggtcgggcaagacgcgggtcctgacc
cgtcgcatcgcctaccgcgtcgccgtcgggaccgccgacccccgccacgtcctggccctg
accttcacccgcaaggcggcgacggagatgggcacccgcctggcgcgcatgggcctgcgg
gaccggccccacgtggggacgctccacgccatggcgtgggcgcaggtccgcatctggtcg
cacgaccggggcaccaccctcccctccctcctccagcacaagggccacctcctgcgggag
ctccccggccggggccacctgcccgtccccgagctggcgtcggagatcgagtgggccggc
gcccgcgacatctcggccgacgactacccgagcgccgcccaccaggaggaccggagggtc
agcgccccgttcgagcaggtcgcctcgctcatcgtcgagtaccgggaggccaagcgtcgc
cgtggggtcatggacttcgacgacatcctgcggacctgcgccgacctcttcgacgaggag
cccgggttcgcccgcacccagcgctggcggttccgccacctgttcgtcgacgagtaccag
gacgtgaacccgctgcagcaccggctgctctcggggtggctgggcgaccggaccgacctg
tgcgtggtcggcgacccgcaccaggcgatctaccgctggaacggcgccgatgccggctac
ctgctccgcttcgcccaggaccacgagggggcggccgtcgtcgagctgcggggcaactac
cgctcgacaccgcagatcctccacctcgccggcgccgtcctgggccccggggcggcccgt
cccctcgcccgccgcccggccggcgatccccccgtcctggtggcctacggcgacgagcac
gaggaggcccggggcgtggcccgggcggcgcgcacgttgcacggccccgggacccgctgg
gacagccaggcggtgctggtgcgcaccaacggccagatgaagccgttcgaggacgccttc
acccgggcccggatcccgttccgcgtccggacggccgagccgctggccggccgggccgac
atcggtgccgccctgcgccacgtcgcccccggcgacggccacccgctccgcaccgtcgtg
gtcgacctcgacgactacgtggccgagcagcaggcggcccggggccgcgacggccagcgg
tcggaggcgctggaggcgctcgtccgcctcgcccgcgagtacagcgccatggagccggag
gccaccgtcggcgacctgcggggctggctgatgacggccatggggctcgacggacccggc
ggcgtcgacgccgtccacctcgtcaccttccacgccgccaagggcctggagtggccggtc
gtgcacatcgccgggctggaggaggggttcgtccccgtctcctacgccaagacgcccgag
gccgaggccgaggagcggcgcctgctccacgtggccatcacccgggccgagcagacgttg
cggatctcgtgggccagcacccggacgatgcgcgacgccccggtggctcgtcggccgtcg
cgctacgtcgacgccctcgccgcggccaaggccgacctcgacgcgctgatgaccatggat
ccgggcgaggggctggcccgctcccgggacgcgctccgcacggccgtcgccgacgacctc
gaccgggccctcctcgacgagctgcacgcgtggcgggcccgggtcgcccgccgggccggc
atcgcccccgcggtggtcgccagcgaccgggttctgggcgacgtggcccggcaccggccc
accgaccgcgccgccctgggggccatcctcggcgtgggccccatggtggtcgacacgcac
ggcgacgacctgctcgggatcgtgtcggcccacgcggccgcagcgggggcgccatga
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