Iamia sp. SCSIO 61187: HC251_09435
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Entry
HC251_09435 CDS
T07394
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam02024
Quorum sensing
iam03060
Protein export
iam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HC251_09435 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HC251_09435 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HC251_09435 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
iam02044
]
HC251_09435 (ffh)
Enzymes [BR:
iam01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HC251_09435 (ffh)
Secretion system [BR:
iam02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HC251_09435 (ffh)
Eukaryotic Sec-SRP protein
HC251_09435 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
nSTAND3
AAA_33
Thymidylate_kin
cobW
APS_kinase
6PF2K
AAA_30
CLP1_P
AAA_31
AAA_16
ArsA_ATPase
ATP_bind_1
AAA_19
KTI12
Motif
Other DBs
NCBI-ProteinID:
QYG92636
LinkDB
All DBs
Position
1955063..1956511
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AA seq
482 aa
AA seq
DB search
MFDALTDRFEGIFTRLRGKGRLGEEEVDEVLREIRLALLEADVSFAVVRGFVARVREACL
GLELSKALNPAQQVIDIVHQELIATLGGETLRITYASKPPTVVLMAGLQGSGKTTTSAKL
ARWFKAQGRNPMLVGADLQRPAAIEQLRTLGRQVDVPVVSKDDAIGGEGGDPVEVAERAI
AEARRLGRDVVIVDTAGRLSIDAELMEQVRQISEVTQPHYTFLVVDAMTGQDAVTTAENF
DQTLALDGVILTKLDGDARGGAALSVKEVVGKPIAFASNGEKIADFDLFHPDRLAGRILG
MGDVLTLIDKAKEHFDEAQAEEAASRLMEGQFTFEDFLEQMQQVKKMGPISGLIGMLPGV
PKELRNQEIDDKELSRVEAMITSMTVEERRRPDIIDGSRRQRIADGSGSNVAEVNALLEQ
FRQMQKMMKSFGMGPKKPKKGKKGKKGGRVTPKGGNPALRGKGPVVPGLPDPTAGEFKLP
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgcactgaccgaccgcttcgaggggatcttcacccgcctgcgtggcaagggc
cgcctgggcgaggaggaggtcgatgaggtcctccgcgagatccgcctggcgctgctggag
gccgacgtcagcttcgccgtggtccggggcttcgtggcccgggtccgcgaggcctgcctg
ggcctggagctgtccaaggccctcaacccggcccagcaggtcatcgacatcgtccaccag
gagctcatcgccacgctcggcggcgagaccctgcggatcacctacgcctccaagcccccg
acggtcgtgctcatggccggcctccagggctcgggcaagaccaccacctcggccaagctg
gcccgctggttcaaggcccagggccgcaaccccatgctcgtcggcgccgacctccagcgc
ccggccgccatcgagcagctccggaccctcggtcgccaggtcgacgtccccgtcgtcagc
aaggacgacgccatcgggggcgagggcggcgatccggtcgaggtcgccgagcgggccatc
gccgaggcccggcggctcgggcgcgacgtcgtcatcgtcgacaccgccggccgcctctcg
atcgacgccgagctcatggagcaggtgcggcagatctccgaggtgacccagccgcactac
acgttcctcgtcgtcgacgccatgaccggccaggacgccgtcaccacggccgagaacttc
gaccagacgctcgccctcgacggcgtcatcctcaccaagctcgacggcgatgcccggggc
ggcgccgccctgtcggtgaaggaggtggtgggcaagcccatcgccttcgcctccaacggc
gagaagatcgccgacttcgacctgttccaccccgaccgcctcgccgggcggatcctgggc
atgggcgacgtcctgaccctcatcgacaaggccaaggagcacttcgacgaggcccaggcc
gaggaggcggccagccgcctcatggagggccagttcaccttcgaggacttcctcgagcag
atgcagcaggtgaagaagatgggccccatctcgggtctgatcgggatgctccccggcgtg
cccaaggagctccgcaaccaggagatcgacgacaaggagctctcccgggtcgaggccatg
atcacctcgatgacggtcgaggagcggcggcgccccgacatcatcgacgggtcccggcgg
cagcggatcgccgacggcagcggctcgaacgtggccgaggtcaacgccctgctcgagcag
ttccgccagatgcagaagatgatgaagagcttcggcatgggccccaagaagcccaagaag
ggcaagaagggcaagaagggcggccgggtcacgcccaagggcggcaaccccgccctccgc
ggcaagggccccgtggtgcccggcctgcccgaccccaccgccggcgagttcaagctcccc
ggcctctag
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