Iamia sp. SCSIO 61187: HC251_09640
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Entry
HC251_09640 CDS
T07394
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
iam
Iamia sp. SCSIO 61187
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iam03016
]
HC251_09640 (truB)
Enzymes [BR:
iam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HC251_09640 (truB)
Transfer RNA biogenesis [BR:
iam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HC251_09640 (truB)
Prokaryotic type
HC251_09640 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QYG92670
LinkDB
All DBs
Position
1997774..1998685
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AA seq
303 aa
AA seq
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MTPPGSDGGRRRAGPDGIAVVDKPAGWTSHDVVAKSRGLLGTRKVGHSGTLDPDATGVLV
LGVGKATRLLRYLTALGKTYEAEIVLGVETTTLDAAGEVTATHDMAGVAIEDARRVVAEQ
LTGPILQVPPMVSALKVDGRRLHELAREGIEVERDARPVTIHRFEVEATDEAGVLRAVVD
CSSGTYVRSLAADLGRALGGGAHLRALRRTAVGGFTLADAVALEALGPDHLLPVARAVGH
LPTLRVGGDLAIAVGHGKVLDRADLGAEGEGPWAVVDDDGTLRAVYQAHKGETAKPEMVI
PTA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccccccggatcggacggcggcagacggcgagccgggccggacggcatcgccgtg
gtcgacaagccggcgggctggacgagccacgacgtggtcgccaagagccggggcctgctc
ggcacccgcaaggtcggccactcgggcaccctggaccccgacgccacgggtgtcctggtg
ctcggggtgggcaaggccacccggctcctgcgctacctgaccgcgctgggcaagacctac
gaggcggagatcgtcctcggcgtcgagaccacgaccctcgacgccgccggcgaggtcacc
gcgacccacgacatggcgggggtcgcgatcgaggacgcccggcgggtggtggccgagcag
ctgacggggccgatcctgcaggtcccgccgatggtgtcggccctcaaggtcgacggccgc
cggctccacgagctggcgcgggaggggatcgaggtcgagcgcgacgcccggccggtgacg
atccaccgcttcgaggtcgaggccaccgacgaggcgggggtcctgcgggcggtcgtcgac
tgctcgtcggggacctacgtccggtccctggccgccgacctcgggcgggccctgggcggg
ggcgcgcacctgcgggccctgcggcgcaccgccgtcgggggcttcaccctcgccgacgcc
gtggccctggaggcgctgggacccgaccacctgctcccggtcgcccgggccgtcggccac
ctgcccaccctgcgggtgggcggggacctggcgatcgccgtgggccacggcaaggtgctc
gaccgcgccgacctgggtgccgagggcgaggggccgtgggcggtggtcgacgacgacggc
accctccgagccgtctaccaggcgcacaagggggagacggccaagcccgagatggtcatc
cccaccgcgtag
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