Iamia sp. SCSIO 61187: HC251_13265
Help
Entry
HC251_13265 CDS
T07394
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC251_13265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iam03019
]
HC251_13265
03016 Transfer RNA biogenesis [BR:
iam03016
]
HC251_13265
Enzymes [BR:
iam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HC251_13265
Messenger RNA biogenesis [BR:
iam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HC251_13265
Transfer RNA biogenesis [BR:
iam03016
]
Prokaryotic type
tRNA degradation factors
HC251_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
PNPase
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QYG93295
LinkDB
All DBs
Position
complement(2778720..2781203)
Genome browser
AA seq
827 aa
AA seq
DB search
MADAITVSAPVSGTDKTLTFETGVLAPQSQGAVVAGIGDTRALVTANGDDKTREGIDFFP
LTVDVEEKMYAIGKIPGSFFRREGRPTDEAVLTCRLIDRPLRPSFADGYRNETQVVATII
GADQVNPHDVVAINGASAALMLSGLPFDGPLGAVRLAYSTEGAWVPHPTFEELEDATFQL
VVAGRSVGEDDVAIMMVEGNGTEKAWSLYEAGAPKVTEAVIAEGLDACKTYIGESIKLQR
ELVEKAGVRPALKWEAQPDYTDEILTAVQAYEADIATANSGADKVERNAATTALRDRILE
DLTAEGKDFAGQAKQVLNALRTTTKKVIRKRLVTDGVRIDGRGPRDLRAVTAQVGVIPTA
HGTGLFQRGETQVLNVLTLGMPRMDQLLDTLSLQNKKRYMHHYNMPPYSNGETGRMGGTK
RREVGHGMLAERALLPVVPSLEEWPYALRLVSEVLSSNGSTSMGSVCASSLSLMDGGVPI
KAPVSGIAMGLVKEGDTYVTLTDILGAEDAFGDMDFKIAGTEEFITALQLDTKIDGLPAD
VLAAALDQAREARMQILEVMNATIAEPRSDVGETAPKMISFEIPIDKIGEVIGPKGKVIN
AIQAETGADISVDDDGTVGTVAIGSTDRGAVAEAERQIKLILDPPTAEVGAVYTGRVVNI
TKFGAFVNILPGRDGLVHISKLGGGKRIDRVEDVVSLGDEIEVRVDDVDPNGKVSLTPAD
QPVEERKPRGEGGDRDRGDRGDRGDRGGRGGRDRDRDSSRSGARDSDSGSVATAAPEAEV
VSFEDAFDAEVAAEFGDLGPAGDDRPRGGGSGGERGAEGGRSRRRRR
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgccatcaccgtgtccgcgccggtctccggcacggacaagaccctgaccttc
gagaccggggtcctggccccgcagtcccagggcgccgtcgtcgccggcatcggcgacacc
cgtgccctcgtcaccgccaacggcgacgacaagacccgcgagggcatcgacttcttcccc
ctgacggtcgacgtcgaggagaagatgtacgccatcgggaagatccccggctcgttcttc
cgccgcgagggccgcccgaccgacgaggccgtgctgacctgccgcctcatcgaccgcccg
ctgcgcccgtcgttcgccgacggctaccgcaacgagacccaggtcgtcgccaccatcatc
ggggccgaccaggtcaacccgcacgacgtggtcgccatcaacggcgcctccgccgccctg
atgctgtcgggcctgccgttcgacggcccgctcggcgccgtccgcctcgcctactccacc
gagggcgcctgggtcccgcacccgaccttcgaggagctcgaggacgccaccttccagctc
gtcgtggccggccgctcggtcggcgaggacgacgtcgccatcatgatggtcgagggcaac
ggcaccgagaaggcgtggagcctctacgaggccggcgcccccaaggtcaccgaggccgtc
atcgccgagggcctcgacgcctgcaagacctacatcggcgagtcgatcaagctgcagcgc
gagctggtcgagaaggccggcgtgcgccccgccctcaagtgggaggcgcagcccgactac
accgacgagatcctcaccgccgtgcaggcctacgaggccgacatcgccaccgccaacagc
ggcgccgacaaggtcgagcgcaacgccgccaccaccgcgctccgcgaccggatcctcgag
gacctgaccgccgagggcaaggacttcgccggccaggccaagcaggtgctcaacgccctg
cgcacgaccaccaagaaggtcatccgcaagcgcctcgtcaccgacggcgtccgcatcgac
ggccgtggcccccgcgacctgcgggccgtcaccgcccaggtcggggtcatccccacggcc
cacggcaccggcctcttccagcgcggcgagacccaggtcctgaacgtgctcaccctgggc
atgccccgcatggaccagctgctcgacacgctgtcgctgcagaacaagaagcgctacatg
caccactacaacatgccgccctactccaacggcgagaccgggcgcatgggcggcaccaag
cgccgcgaggtcggccacggcatgctcgccgagcgggccctgctgccggtcgtcccgtcg
ctcgaggagtggccctacgccctccgcctggtgtccgaggtcctgtcgtccaacggctcg
acctcgatgggctcggtctgcgcctcgtcgctgtcgctgatggacggcggcgtgccgatc
aaggcgccggtgtccggcatcgccatgggcctggtcaaggagggcgacacctacgtcacc
ctgaccgacatcctcggggccgaggacgccttcggcgacatggacttcaagatcgccggc
acggaggagttcatcaccgccctccagctcgacaccaagatcgacggcctccccgccgac
gtcctggccgccgccctcgaccaggcccgcgaggcccggatgcagatcctcgaggtcatg
aacgccaccatcgccgagccccgctcggacgtgggcgagaccgccccgaagatgatcagc
ttcgagatcccgatcgacaagatcggcgaggtcatcgggcccaagggcaaggtcatcaac
gccatccaggccgagaccggcgccgacatctccgtcgacgacgacggcaccgtcggcacc
gtggccatcggctccaccgaccgcggtgcggtcgccgaggccgagcgccagatcaagctg
atcctcgacccgcccaccgccgaggtcggcgccgtctacaccggtcgggtcgtgaacatc
accaagttcggtgcgttcgtgaacatcctcccgggccgtgacggcctggtccacatctcc
aagctcggtggcggcaagcgcatcgaccgggtcgaggacgtggtcagcctgggcgacgag
atcgaggtccgcgtcgacgacgtcgaccccaacggcaaggtcagcctgaccccggccgac
cagcccgtcgaggagcgcaagccccgcggcgagggtggcgaccgggaccgcggcgaccgt
ggtgaccggggcgatcgcggcggccgtggtggccgtgaccgtgaccgtgacagcagccgc
agcggtgcccgcgactccgacagcgggtccgtggccaccgccgcccccgaggccgaggtc
gtgtccttcgaggacgccttcgacgccgaggtggccgccgagttcggcgacctgggcccg
gccggcgacgaccgcccccggggcggcggcagcggtggtgagcgcggcgccgagggcggc
cgctcccggcgccggcgccgctga
DBGET
integrated database retrieval system
