Iamia sp. SCSIO 61187: HC251_13445
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Entry
HC251_13445 CDS
T07394
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03030
DNA replication
iam03410
Base excision repair
iam03420
Nucleotide excision repair
iam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC251_13445 (polA)
03410 Base excision repair
HC251_13445 (polA)
03420 Nucleotide excision repair
HC251_13445 (polA)
03440 Homologous recombination
HC251_13445 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iam03032
]
HC251_13445 (polA)
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_13445 (polA)
Enzymes [BR:
iam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HC251_13445 (polA)
DNA replication proteins [BR:
iam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HC251_13445 (polA)
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HC251_13445 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC251_13445 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
QYG93329
LinkDB
All DBs
Position
complement(2829615..2832335)
Genome browser
AA seq
906 aa
AA seq
DB search
MALMLIDGNSLTYRAFHALPPDLTTASGQVTNAVFGFTSMLVNLLKDHQPDGVAVAFDRP
EPTFRHDINPEYKGNRSKAPDILRQQMPLVRQVIESLAIPSIEQIGIEADDIIATLATRA
RDAGRDVLIVTGDRDAYQLVEDPHIRVIYNKRGVSDYANYDEKGIEERTGVRPDLYVLYA
AMRGDPSDNLPGVPGVGEKTAAKLINAYGTLDELFAHVDDQTPKLRENLAANEAQVRANA
ELMVLRRDCELDVDIETLKMGEPDVDEVRRLFDFLEFRTLWDRLVEALGQDLGSLGAETS
VLDAEVVEPQSTDEALARLGAVAGEGRGEPIGVAAAFDGTPRWDSDPLGVALVLDPEAGD
VLWLSADHLGDPEVRSALADVFTGPHARPVVAHDAKPLLRWLARTDPHGQPASLVCSLGL
DTALAAYLIDPAEGRYELAPLLAKHAHAELATDGDAPPEGQLDFVAPEDDLTARAMRVAC
RTALGVAHLAEPLFASLDAQGLRTLHDEIEAPIVAVLAAMEIVGVGVDKELLVEISDKMR
DEVIRLQQQIWEIAGEEFNVNSTPQLRTLLFDKLGLTPQKKTKTGFSTDAQSLEKLRGQH
EVVDALLAYREVEKLRSTYGTGLLAEIAPDGRIHATFNQTVARTGRLSSDAPNLHNIPVR
SEQGRAFRTVFVPAPGCELLVADYNQIELRCIAHLAEDPGLVQAFTDGTDIHTTTAARVF
GVPDSEVTPSQRAKAKMVSYGLAYGMEAYGLSQRLNISVEEARGILDAYFVAFPAVKDYM
DRTVAEARDRGYTETLFGRRRPIPELQSRNRGIRMAGERQAMNAGIQGLAADIFKVALVR
LDQALADQGAASRVILQVHDEVILDVEPKEHDAIAALTLEVMRGAADLRVPLEVNLAFGA
TWADAK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggctctgatgctgatcgacgggaactcgctgacctaccgcgcgttccacgccctcccc
ccggacctgaccaccgcctcgggccaggtcaccaacgccgtcttcgggttcacgtcgatg
ctggtgaacctgctgaaggaccaccagcccgacggcgtggcggtcgccttcgaccgaccc
gagcccacgttccgccacgacatcaaccccgagtacaagggcaaccgctccaaggccccc
gacatcctgcgccagcagatgccgctggtccgccaggtcatcgaatcgctcgccatcccc
tcgatcgagcagatcgggatcgaggccgacgacatcatcgccaccctcgccacccgggcc
cgagatgccgggcgggacgtgctgatcgtcaccggcgaccgggacgcctaccagctggtc
gaggacccgcacatccgggtcatctacaacaagcggggcgtctcggactacgcgaactac
gacgagaagggcatcgaggagcggaccggtgtccgccccgacctctacgtgctctacgcc
gccatgcggggcgacccgtcggacaacctgcccggcgtgcccggggtgggggagaagacg
gcggccaagctgatcaacgcctacggcacgctcgacgagctcttcgcccacgtcgacgac
cagacccccaagctccgggagaacctggccgccaacgaggcccaggtccgggccaacgcc
gagctcatggtgctgcggcgcgactgcgagctcgacgtcgacatcgagacgctcaagatg
ggtgagcccgacgtcgacgaggtccgccgcctcttcgacttcctcgagttccgcaccctc
tgggaccggctggtcgaggccctcggccaggacctcggatcgctcggggccgagacctcg
gtgctcgacgccgaggtggtcgaaccgcagtcgaccgacgaggccctggcccggctgggc
gccgtcgccggcgagggccggggcgagcccatcggggtcgccgccgccttcgacggcaca
ccccgctgggactccgacccgctcggcgtggccctcgtgctcgaccccgaggccggcgac
gtcctgtggctgtcggccgaccacctcggcgacccggaggtccggtccgccctggccgac
gtcttcaccgggccccacgcccgccccgtcgtcgcccacgacgccaagcccctcctccgc
tggctggcccgcaccgacccccacggccagcccgcctcgctggtgtgctccctcggtctc
gacaccgccctggcggcctacctgatcgacccggccgagggccgctacgagctggccccc
ctgctggccaagcacgcccacgccgagctggccaccgacggtgacgccccgcccgagggc
cagctcgacttcgtcgcccccgaggacgacctcaccgcccgggccatgcgggtcgcctgc
cgcaccgccctgggcgtggcccacctggccgagccgctgttcgcctccctcgacgcccag
gggctgcggaccctgcacgacgagatcgaggcgcccatcgtcgccgtgctggcggccatg
gagatcgtcggcgtgggcgtcgacaaggagctgctcgtcgagatcagcgacaagatgcgc
gacgaggtgatccggctccagcagcagatctgggagatcgcgggtgaggagttcaacgtg
aactccaccccccagctgcggaccctcctgttcgacaagctcgggctgacgccgcagaag
aagaccaagacgggcttctcgaccgacgcccagtcgctggagaagctgcgcggccagcac
gaggtcgtcgacgccctgctggcctaccgagaggtggagaagctgcgctcgacctacggc
accggcctgctggccgagatcgcccccgacggccgcatccacgccaccttcaaccagacg
gtggcccgcaccggccggctctcctccgacgccccgaacctgcacaacatcccggtccgc
tccgagcaggggcgggcgttccgcacggtcttcgtcccggccccgggctgcgagctcctg
gtggccgactacaaccagatcgagctgcgctgcatcgcccacctggccgaggacccgggc
ctggtgcaggccttcaccgacgggaccgacatccacacgaccaccgcggcgcgcgtcttc
ggggtgcccgactccgaggtcacgccctcccagcgggccaaggccaagatggtcagctac
ggcctggcctacggcatggaggcctacgggctctcgcagcggctcaacatctcggtcgag
gaggcgcgggggatcctcgacgcctacttcgtggccttccccgcggtgaaggactacatg
gaccgcaccgtcgccgaggcccgggaccggggctacaccgagaccctcttcggccggcgc
cgccccatccccgagctgcagtcccgcaaccggggcatccggatggccggggagcgccag
gcgatgaacgccgggatccagggcctggccgccgacatcttcaaggtggccctggtccgg
ctcgatcaggcgctcgccgaccagggggcggccagccgggtgatcctgcaggtccacgac
gaggtgatcctcgacgtggagccgaaggagcacgacgccatcgccgcgctcaccctcgag
gtcatgcggggcgcggccgacctccgggtccccctcgaggtcaacctggccttcggggcg
acctgggccgacgccaagtag
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