Iamia sp. SCSIO 61187: HC251_18030
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Entry
HC251_18030 CDS
T07394
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HC251_18030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_18030
Enzymes [BR:
iam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HC251_18030
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HC251_18030
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HC251_18030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QYG94154
LinkDB
All DBs
Position
complement(3785310..3786143)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEMETLRRDLDREVGGKRVKTTEVTGRTAMGAVPKKQLIERLDGVKVSGADRRGLI
LTLKLDSGELLVLDIREGGHLRKTTPKEEVAKGTQVVISFTQGGQLRMVDTTGKMKIWVA
TPDELLEQEPILTQLGLDPVVEPISWTTFGHLLLSRAQPIKSFLMDPTAVVGIGPIYSDE
IIWQAGLRHDRESNRLTSQEMRRLYRALVETLHDGAKHRGTTLGEDGYYDLAGKPGGFQE
YLEVYERAGKACSRCRGTITKVKFAKANLFMCPDCQV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgagatggagaccctccgacgcgacctcgaccgcgaggtcgggggc
aagcgggtcaagaccacggaggtgacggggcggacggccatgggcgccgtccccaagaag
cagctcatcgagcgcctcgacggcgtgaaggtcagcggcgccgaccgccgcgggctgatc
ctcaccctcaagctcgacagcggtgagctgctcgtcctcgacatccgcgagggcggccac
ctccgcaagaccacccccaaggaggaggtggccaagggcacccaggtcgtcatctccttc
acccagggcggccagctgcgcatggtcgacaccacggggaagatgaagatctgggtcgcc
acccccgacgagctgctcgagcaggagccgatcctcacccagctgggcctcgaccccgtc
gtcgagcccatctcgtggacgaccttcgggcacctgctgctcagccgggcccagcccatc
aagagcttcctgatggacccgaccgccgtggtcggcatcggcccgatctactccgacgag
atcatctggcaggccggcctccgccacgaccgcgagtccaaccgcctcacgtcccaggag
atgcgccgcctgtaccgcgccctggtcgagacgctccacgacggggccaagcaccgcggc
accaccctgggcgaggacggctactacgacctcgccggcaagcccggcgggttccaggag
tacctcgaggtctacgagcgggccggcaaggcgtgcagccggtgccggggcaccatcacc
aaggtgaagttcgccaaggccaacctgttcatgtgccccgactgccaggtctga
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