Iamia sp. SCSIO 61187: HC251_18035
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Entry
HC251_18035 CDS
T07394
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HC251_18035 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iam03019
]
HC251_18035 (rnc)
03009 Ribosome biogenesis [BR:
iam03009
]
HC251_18035 (rnc)
03036 Chromosome and associated proteins [BR:
iam03036
]
HC251_18035 (rnc)
Enzymes [BR:
iam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HC251_18035 (rnc)
Messenger RNA biogenesis [BR:
iam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HC251_18035 (rnc)
Ribosome biogenesis [BR:
iam03009
]
Eukaryotic type
90S particles
RNase
HC251_18035 (rnc)
Prokaryotic type
rRNA processing factors
HC251_18035 (rnc)
Chromosome and associated proteins [BR:
iam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HC251_18035 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QYG95634
LinkDB
All DBs
Position
complement(3786136..3786978)
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AA seq
280 aa
AA seq
DB search
MSASDTVPPVAPLADRIGYSFVDPGLLEIAMCHRSWCAENAGGTSNERLEFLGDAVLGAV
VAEELYRRFPDADEGWLSRARATVVRATTLAETAEELGLGAVVRLGKGEEATGGREKPSI
LADALEAVIGAVHLDGGRDASRAAVMTFLGDRIRSASGEPGHLDDKSRLQEHVSRVLREV
VSYRVTDTGPEHDKTFTAIARISGTPWGEGTGRSKKQAEQLAARAAYDALLAAHPPAPVL
AAGQADPPTEALAAGEADPPTETTATAEDPSAPTEKTDDA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ctgagcgcgagcgacacggtccccccggtcgcgccgctggccgaccgcatcgggtactcc
ttcgtcgaccccgggctgctcgagatcgccatgtgccaccgctcgtggtgcgccgagaac
gccggcgggacgtcgaacgagcgcctcgagttcctgggtgacgccgtgctcggcgccgtc
gtggccgaggagctgtaccgcaggttccccgacgccgacgagggctggctgtcgcgcgcc
cgggccacggtcgtccgggccaccaccctggccgagacggccgaggagctcggcctgggt
gccgtcgtccgcctgggcaagggcgaggaggccaccggcgggcgggagaagccgtcgatc
ctggccgacgccctcgaggccgtcatcggcgccgtccacctcgacggcggtcgcgacgcc
tcccgggccgccgtcatgacgttcctcggcgatcgcatccggagcgcgtcgggcgagccc
ggccacctcgacgacaagagccggctccaggagcacgtcagccgggtgctgcgcgaggtc
gtctcctaccgcgtcaccgacaccggccccgagcacgacaagaccttcaccgccatcgcc
cgcatcagcggcaccccctggggcgagggcacgggccggtccaagaagcaggccgagcag
ctcgcggcccgcgccgcctacgacgcgctgctcgccgcccacccgcccgccccggtgctc
gccgccggccaggccgatccgcccaccgaggcgctcgccgccggcgaggccgatcccccc
accgagaccaccgcaacggccgaggacccctcggccccgactgagaagaccgacgatgcc
tga
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