Iamia sp. SCSIO 61187: HC251_21055
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Entry
HC251_21055 CDS
T07394
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
iam
Iamia sp. SCSIO 61187
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iam03021
]
HC251_21055
Transcription machinery [BR:
iam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HC251_21055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QYG94676
LinkDB
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Position
complement(4391028..4391963)
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AA seq
311 aa
AA seq
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MAKERVERDEEDLVRLYLTDIGQYPLLTKDDEVRLAQAIEAGAEARIALESGDKVTPAKK
RELRRTARDGEQAERTFVQSNLRLVVSIAKKYQASGLPLLDLIQEGNLGLMHAVEKFDWR
KGFKFSTYATWWIRQAITRGIANTGRTIRLPVHAGDTLARLQKARARLELKLGRPATLAE
LSAEVEMPEDKVTEALRFAAEPLSLSEPLREDGDAELGDVVEDRSAESPFEVAATALLPE
EINRLLAPLDDREREILKLRFGLDRGEPRTLEEVGEHFNLTRERIRQIEARAMSKLRHPS
SDTGARDLLAV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaggagcgcgtcgagcgcgatgaggaagacctcgtccgcctctacctcacggac
atcgggcagtacccactgctcacgaaggacgacgaggtgcgcctggcccaggccatcgag
gccggtgcggaggcccgcatcgccctggagtcgggggacaaggtcaccccggccaagaag
cgcgagctgcgccgcaccgcccgcgacggcgagcaggccgagcgcacgttcgtgcagtcg
aacctgcggctggtcgtctcgatcgccaagaagtaccaggcctcgggcctgccgctgctg
gacctgatccaggagggcaacctcggcctcatgcacgccgtcgagaagttcgactggcgc
aagggcttcaagttctcgacctacgccacgtggtggatccgccaggccatcacccgcggc
atcgccaacaccgggcgcaccatccgcctccccgtccacgccggcgacaccctggcccgg
ctccagaaggcccgggcccggctcgagctcaagctcgggcgcccggccaccctcgccgag
ctctcggccgaggtcgagatgcccgaggacaaggtcaccgaggcgctccgcttcgcggcc
gagcccctctcgctgtcggagccgctgcgcgaggacggcgacgccgagctcggcgacgtg
gtcgaggaccgctcggccgagtcgcccttcgaggtggccgccaccgcgctcctccccgag
gagatcaaccgcctcctggcccccctcgacgaccgcgagcgcgagatcctcaagctgcgc
ttcggcctcgaccggggcgagccccgcacgctcgaggaggtgggggagcacttcaacctc
acccgcgagcgcatccgccagatcgaggcccgggccatgtcgaagctgcgccacccatcc
tcggacaccggcgcccgcgacctcctggccgtctga
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