Iamia sp. SCSIO 61187: HC251_23005
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Entry
HC251_23005 CDS
T07394
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03030
DNA replication
iam03430
Mismatch repair
iam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC251_23005 (dnaX)
03430 Mismatch repair
HC251_23005 (dnaX)
03440 Homologous recombination
HC251_23005 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iam03032
]
HC251_23005 (dnaX)
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_23005 (dnaX)
Enzymes [BR:
iam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HC251_23005 (dnaX)
DNA replication proteins [BR:
iam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HC251_23005 (dnaX)
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HC251_23005 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_16
Mg_chelatase
AAA_14
AAA_18
AAA_28
AAA_19
DnaX_C
Rad17
VapE-like_dom
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QYG95016
LinkDB
All DBs
Position
complement(4786280..4788241)
Genome browser
AA seq
653 aa
AA seq
DB search
MAHQSLYRRYRPQRFSEVRGQDTVVGALRAAVAEDRVGHAYLFSGPRGTGKTSTARILAK
ALNCEDLQGGEPCGVCPSCVAMQAGTSYDLQELDAASNNKVEDVRALIERVALGSPGRTK
VYILDEVHMLSAGASNALLKTLEEPPDHVVFVLATTDPQKVLPTIRSRTQHFEFHLLPAD
ELADHVRWVIADAGLDVDDSAVEHVLRAGGGSARDTLSYLDQAAAGGVNVDGDHAEALAE
AVVAVDTAAALSAVATATIAGRDPRILGEALLAHLRDVFLLRMGGPLGHLSDAARGRVEG
WAGRTTDRSVTRALEEVGEALLAMRQAPDPRIPLEVALVRITRSAPAAGAGGDGGSEALE
ELAGRVARLEAAVRTGGGPDGTRGGAEASAGPSASSAPSPAAAASPPPAAPTPAPAPATA
APEPEPAAPLSTASAREAARAAIPQAAKRGGGSSSPRPGRAPAEAPPPPPRPAASRPPAA
PPAAAPPPAAEPAAEPEAPTESPGAATPDAAPAVAAEAGPDLATLWADRVVPDELRGMTK
ALYKLGQVVGVDGDSVTIGLPNQAHLARCQEKKAEVEAAVAKAAGRPVRLVLVVGGDDDD
GAGSSGGPGGSAPPGPAADESIDPAELVDAPAQQLTGVDRVTEAFPGAQIVEP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccagtcgctctaccgccgctaccgcccgcagcggttctccgaggtgcgcggc
caggacaccgtcgtcggcgccctccgcgccgctgtcgccgaggaccgcgtcggccacgcc
tacctcttcagcgggccccggggcacgggcaagacctcgacggcccggatcctggccaag
gcgctcaactgcgaggacctccagggcggggagccgtgcggcgtctgcccctcgtgcgtg
gccatgcaggccgggacctcctacgacctccaggagctcgacgccgccagcaacaacaag
gtcgaggacgtccgggccctcatcgagcgggtcgccctgggcagccccggccggaccaag
gtgtacatcctcgacgaggtccacatgctgtcggcaggtgcgtccaacgccctgctgaag
acgctggaggagccccccgaccacgtcgtgttcgtgctggccaccaccgacccgcagaag
gtcctgccgaccatccgcagccggacccagcacttcgagttccacctcctgccggccgac
gagctggccgaccacgtgcggtgggtcatcgccgacgccggcctcgacgtcgacgacagc
gcggtggagcacgtcctgcgcgccggcggcggctccgcccgcgacacgctctcctacctc
gaccaggccgccgccggcggggtcaacgtcgacggagaccacgccgaggccctggccgag
gcggtcgtggccgtggacaccgccgccgccctgtcggccgtcgccaccgccaccatcgcc
gggcgcgacccgcgcatcttgggcgaggccctgctggcccacctgcgcgacgtgttcctc
ctccgcatgggcggcccgctgggccacctgtccgacgccgcccgggggcgggtcgagggc
tgggccggccggaccaccgaccggagcgtcacccgcgccctcgaggaggtcggcgaggcg
ctcctcgccatgcgccaggccccggacccccgcatcccgctcgaggtggcgctggtccgc
atcacccgctcggcccccgcggccggcgccggcggcgacggcgggagcgaggcgctcgag
gagctggcggggcgcgtcgcccggctcgaggccgccgtccgcacgggaggcgggcccgac
ggaacccgcggcggggccgaggcgtccgcgggcccgtcggcgagctcggccccgtcgccg
gccgcggcagcgtccccgcccccggccgccccgaccccggcgcccgctccggcgacggcg
gcgcccgagcccgagccggccgcccccctgagcaccgccagcgcccgggaggcggcccgg
gcggcgatcccccaggcggccaagcgcgggggcgggtcctcgtcgcctcgccccgggcgg
gcgcccgccgaagcgccgcccccgccgccgcgcccggccgcgagccgtccgcccgcggcc
ccgcccgccgccgccccgccgcccgccgccgagccggccgccgagcccgaggcgccgacg
gaatcgccgggcgcggcaacccccgatgccgctcccgccgtcgccgccgaggccgggccc
gacctggccacgctgtgggccgaccgggtcgtgcccgacgagctccggggcatgaccaag
gcgctctacaagctgggccaggtcgtcggcgtcgacggcgactcggtcaccatcggcctg
cccaaccaggcccacctcgcccgctgccaggagaagaaggccgaggtcgaggcggcggtg
gccaaggccgccggccgccccgtccggctggtgctcgtcgtcgggggcgacgacgacgac
ggcgccggctcctcgggcggacccggcgggtcggccccgccgggaccggccgccgacgag
tccatcgaccccgccgagctggtggacgcccccgcgcagcagctcaccggcgtcgaccgg
gtgaccgaggccttccccggcgcccagatcgtcgaaccctga
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