Iamia sp. SCSIO 61187: HC251_23110
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Entry
HC251_23110 CDS
T07394
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
iam
Iamia sp. SCSIO 61187
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iam03021
]
HC251_23110
Transcription machinery [BR:
iam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HC251_23110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
GerE
HTH_24
MarR
MarR_2
NirdL-like_HTH
DUF7343
DUF134
HTH_15
HTH_Tnp_4
HTH_AraC
HTH_31
HTH_28
HTH_29
KORA
HTH_7
KorB
Motif
Other DBs
NCBI-ProteinID:
QYG95033
LinkDB
All DBs
Position
4810822..4811577
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AA seq
251 aa
AA seq
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MSLDDAEREHLRERFRAYQETGDRTIRDELIEAHLRLAEHLARRFNNRGVPLEDLVQVAS
LGLVKAVERFEPERGLEFSTFATPTIVGELKRHFRDKGWSVRVPRRIQELHVEVNSLVGT
LTQRLGRSPTIAELARASGTSEEEVLEAMEAAQAYRSTSIDAPSGGEDSGLGLAGQLGDE
DTNLFAAENRMLVATLVDTLPKREQLIMRLRFYDGMTQSQIADRLGISQMHVSRLLARSL
GQLRSRLEHEG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctcgacgacgccgagcgcgagcacctgcgggagcgcttccgggcctaccaggag
acgggggaccggacgatccgcgacgagctcatcgaggcccacctgcggctcgccgagcac
ctggcccgccggttcaacaaccggggcgtgcccctcgaggacctcgtccaggtggcgtcg
ctcggcctggtcaaggcggtggagcggttcgagcccgagcggggcctggagttctcgacc
ttcgccacgccgaccatcgtcggcgagctcaagcgccacttccgcgacaagggctggtcg
gtgcgggtgccgcgccggatccaggagctccacgtcgaggtcaactcgctcgtcgggacc
ctgacccagcgcctggggcgctcccccaccatcgccgagctggcccgggcgtcgggcacc
tcggaggaggaggtcctggaggccatggaggcggcccaggcctaccggtcgacgtcgatc
gacgccccgtcgggcggcgaggactccgggctcggcctggccgggcagctgggcgacgag
gacaccaacctgttcgcggcggagaaccggatgctggtggccacgctcgtggacacgctg
cccaagcgcgagcagctgatcatgcggctccgcttctacgacggcatgacgcagagccag
atcgccgaccgcctgggcatcagccagatgcacgtgtcgcggctcctggcccgcagcctg
ggccagctgcgctcccgcctcgagcacgagggctag
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integrated database retrieval system
