Iamia sp. SCSIO 61187: HC251_23120
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Entry
HC251_23120 CDS
T07394
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HC251_23120 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iam03019
]
HC251_23120 (orn)
03009 Ribosome biogenesis [BR:
iam03009
]
HC251_23120 (orn)
Messenger RNA biogenesis [BR:
iam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HC251_23120 (orn)
Ribosome biogenesis [BR:
iam03009
]
Eukaryotic type
Pre-60S particles
RNases
HC251_23120 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QYG95722
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All DBs
Position
4812222..4812764
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AA seq
180 aa
AA seq
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MDLEMTGLDPDRCAIVEIATLITDDELEIVAEGPDLVVHQPPEVLAGMEDIVRSMHTKSG
LLPAIAASTTTLEEAGAATLAFIREHVPEPRTVPLCGNSIGTDRRFLAKYLPEIEEHLHY
RSVDVSSVKELVRRWYPEVLDQMVRKQTSHRALDDIRESIDELRVYRARVFRAEALAPGA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggatctggagatgacggggctggaccccgaccggtgcgccatcgtcgagatcgccacc
ctcatcaccgacgacgagctcgagatcgtggccgaggggcccgacctcgtcgtccaccag
ccgcccgaggtcctggccggcatggaggacatcgtgcggtcgatgcacacgaagtccggg
ctgctcccggccatcgcggcgtcgaccacgacgctcgaggaggccggcgccgcgaccctc
gccttcatccgcgagcacgtgcccgagccccgcaccgtgccgctgtgcggcaactccatc
gggaccgatcggcgcttcctcgccaagtacctccccgagatcgaggagcacctccactac
cgctccgtcgacgtctcgagcgtcaaggagctggtgcggcgctggtaccccgaggtgctc
gaccagatggtgcgcaagcagacgagccaccgggccctcgatgacatccgcgagagcatc
gacgagctgcgcgtctaccgcgcccgggtgttccgggccgaggcgctcgcccccggcgcc
tga
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