KEGG   Intestinibacter bartlettii: NQ514_03030
Entry
NQ514_03030       CDS       T08452                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ibr  Intestinibacter bartlettii
Pathway
ibr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ibr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NQ514_03030 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ibr03400]
    NQ514_03030 (uvrA)
DNA repair and recombination proteins [BR:ibr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NQ514_03030 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NQ514_03030 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N RsgA_GTPase AAA_29 nSTAND3 AAA_21 AAA_16 AAA_22 nSTAND1 AAA_25 DnaJ_CXXCXGXG AAA_18 AAA_14 ATPase Viral_helicase1 MMR_HSR1 NACHT cobW AAA_15 NB-ARC MeaB AAA_24 AAA_23 KORA
Other DBs
NCBI-ProteinID: UWO81471
LinkDB
Position
571294..574119
AA seq 941 aa
MEDKIVIRGAKENNLKNVDLVIPRNKFIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGQMEKPNVEYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGDVY
CPVCGNKISQMTVQEIVDKILELPERTKLQILSPIVRGQKGTHKKTLEGLKKEGFVRVRV
NGENYEVTDEIELSKNKKHNIEVVVDRIVVKDGIEGRLSDSIETAIKLSDGLVIAQIIDG
EEILYSTKFACPDHGIGIEELSPRMFSFNAPFGACDECNGLGERRNVDEDLVIPNKDLSI
NQGAIAAWGSVSKSNDTYYSKMVRSLAEIYGVSLDTPFKDLPEDFVDELLYGRNNTIVEF
EFDSKFGGRREYRAPFEGVLVNLERRYNETSSEYAKDKIDEFMAETPCPKCKGHRLKKEV
LSVKVGGKNIIEVTELSINELIDFINNLELSEKNQFIAQEILKEIRERATFLRNVGLEYL
NLARKAGTLSGGEAQRIRLATQIGSALVGVLYVLDEPSIGLHQRDNDKLIASLQNLTKIG
NTLIVVEHDEDTMRAADYIVDIGPGAGVHGGEIVAQGTFEEIIQNPNSITGMYLSGKKTI
DVPETIREGNGEFIEIVKASENNLKNLNVKIPLGKFVCITGVSGSGKSTLINEILYKSVA
NKVNRSRMKPGKHKEIKGIENIDKIINIDQSPIGRTPRSNPATYTGIFDHIRDLFAMTNE
AKARGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCKGERYNRETLQVKY
KDKTISDVLDMNVEEALEFFENIPTIKRKLETLMDVGLSYIKLGQPSTQLSGGEAQRIKL
ATELSKRPTGKTLYILDEPTTGLHMADVDKLIDVLQRLADTGNSIVVIEHNLDVIKSCDY
IIDLGPEGGDNGGTIVATGTPKEVSKVEKSYTGQFLKKYFE
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggaagataaaatagtcataagaggtgctaaagaaaacaatttaaaaaatgtagattta
gtcatccctagaaataaatttatagtattcacaggactatcaggttcaggaaaatcttca
ttagcatttgatacaatctatgctgaagggcagagacgatatgtagaaagtctttcatct
tatgctagacaatttttaggtcaaatggagaaacctaatgtggaatacatagaaggtctt
tcacctgctatatcgatagaccaaaagacaacttcgagaaatccaaggtctacagtagga
acagtaacagagatatacgactatttgagacttttatttgcaagagtgggagatgtatat
tgtcctgtttgtggaaataaaataagtcagatgactgtccaagagattgtagataaaata
ttagaattaccagaaagaacaaagttacaaatactgtctcctatcgttaggggtcaaaaa
ggaacgcataaaaaaacccttgaaggattaaaaaaagaaggatttgtaagagttagggta
aatggagaaaattacgaagttacagatgaaattgaactaagtaagaataaaaaacataac
atagaagttgttgtagatagaatagtggtgaaagatggtatcgaaggaagactttctgat
tctatagaaacagcaattaaattatctgatggattagttattgcccaaattatagatgga
gaagaaatactgtattcaactaaatttgcatgtcctgatcatggaataggaatagaagaa
ttatcaccaagaatgttctcatttaatgctccttttggtgcatgtgatgaatgtaatgga
ttaggagaacgtagaaatgtagatgaagatttagttataccaaataaagatttatctata
aatcaaggtgcaattgcagcgtggggttctgttagcaagagtaatgacacttactatagc
aaaatggtaagaagcctagctgaaatatatggtgtatcactagatactccatttaaagat
ttaccagaagactttgtagatgagttactttacggaagaaacaatacaatagtagaattt
gaatttgattcaaaattcggaggaagaagagaatatagagcgccttttgagggtgtactt
gttaacttagaaagaagatataacgaaacttcttctgaatatgcaaaggataaaatcgat
gaatttatggcggagactccttgtccaaaatgtaaaggtcatagattgaaaaaggaggtt
ttatcagttaaagtcggtggaaaaaatataatagaagtaacagaactttctataaatgaa
ttaatcgattttataaataatttagagttaagcgaaaaaaatcaatttattgctcaggaa
atattaaaagaaatacgtgaaagagcaactttcttacgaaacgtaggtcttgaatattta
aacttagcaagaaaagctggaactctatctggtggagaggcacaacgtataagattagca
actcaaataggttctgctttagtcggtgtactttatgtacttgatgaaccaagtattgga
cttcaccaaagagataatgataagttaatagcatcattacaaaacttaacgaaaatagga
aatacattgatagttgttgaacatgatgaagatactatgagagcagcagattatatcgta
gatataggtcctggggcaggagtgcacggtggtgaaatagttgctcaaggtacatttgag
gaaataatccaaaatccaaattctataacaggtatgtatctaagtggaaagaaaactata
gatgtaccagaaacaattagagaaggaaatggagaatttatagaaatagtaaaagctagt
gaaaataaccttaaaaatttaaatgtaaaaatacctttaggaaaattcgtatgtataact
ggggtttctggttcaggaaaaagtacacttataaatgaaatattatacaaaagtgttgct
aacaaagtaaatagatctagaatgaaaccaggaaagcataaagaaataaaaggtatagaa
aatatagataaaataataaatatagaccaaagtcctataggtagaactcctagatcaaat
ccagcaacatatacaggaatattcgatcatataagagatttatttgctatgactaatgaa
gcaaaggctagaggatataaaaaaggaagattcagtttcaatgtaaaaggtggaaggtgc
gaggcttgtaaaggtgatggaataatcaagatagaaatgcacttcctaccagatgtatac
gttccttgtgaagtatgtaaaggggaaagatacaacagagaaactcttcaggttaaatat
aaagataaaacaatttctgatgtattagatatgaatgtagaagaagcattagaattcttt
gaaaatataccaacaataaaaagaaaattagagacacttatggatgttgggctttcatat
ataaaactaggtcaaccatcaactcaattatcaggcggtgaagcacaaagaattaaatta
gctactgaattgagtaaaagacctactggaaagacattatatattttagatgaacctaca
acaggtttacacatggcagatgtagacaaattaatagatgttttacaaagattagctgat
acaggcaattctatcgtagtaatagagcataatctagatgttatcaagagttgcgattat
ataattgatttaggaccagaaggtggagacaatggaggaactattgttgcaacaggaacg
ccaaaagaagtttcaaaagtagaaaaatcttatactggacaattcttgaagaaatatttt
gaataa

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