Intestinibacter bartlettii: NQ514_03030
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Entry
NQ514_03030 CDS
T08452
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ514_03030 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ibr03400
]
NQ514_03030 (uvrA)
DNA repair and recombination proteins [BR:
ibr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ514_03030 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ514_03030 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
nSTAND3
AAA_21
AAA_16
AAA_22
nSTAND1
AAA_25
DnaJ_CXXCXGXG
AAA_18
AAA_14
ATPase
Viral_helicase1
MMR_HSR1
NACHT
cobW
AAA_15
NB-ARC
MeaB
AAA_24
AAA_23
KORA
Motif
Other DBs
NCBI-ProteinID:
UWO81471
LinkDB
All DBs
Position
571294..574119
Genome browser
AA seq
941 aa
AA seq
DB search
MEDKIVIRGAKENNLKNVDLVIPRNKFIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGQMEKPNVEYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGDVY
CPVCGNKISQMTVQEIVDKILELPERTKLQILSPIVRGQKGTHKKTLEGLKKEGFVRVRV
NGENYEVTDEIELSKNKKHNIEVVVDRIVVKDGIEGRLSDSIETAIKLSDGLVIAQIIDG
EEILYSTKFACPDHGIGIEELSPRMFSFNAPFGACDECNGLGERRNVDEDLVIPNKDLSI
NQGAIAAWGSVSKSNDTYYSKMVRSLAEIYGVSLDTPFKDLPEDFVDELLYGRNNTIVEF
EFDSKFGGRREYRAPFEGVLVNLERRYNETSSEYAKDKIDEFMAETPCPKCKGHRLKKEV
LSVKVGGKNIIEVTELSINELIDFINNLELSEKNQFIAQEILKEIRERATFLRNVGLEYL
NLARKAGTLSGGEAQRIRLATQIGSALVGVLYVLDEPSIGLHQRDNDKLIASLQNLTKIG
NTLIVVEHDEDTMRAADYIVDIGPGAGVHGGEIVAQGTFEEIIQNPNSITGMYLSGKKTI
DVPETIREGNGEFIEIVKASENNLKNLNVKIPLGKFVCITGVSGSGKSTLINEILYKSVA
NKVNRSRMKPGKHKEIKGIENIDKIINIDQSPIGRTPRSNPATYTGIFDHIRDLFAMTNE
AKARGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCKGERYNRETLQVKY
KDKTISDVLDMNVEEALEFFENIPTIKRKLETLMDVGLSYIKLGQPSTQLSGGEAQRIKL
ATELSKRPTGKTLYILDEPTTGLHMADVDKLIDVLQRLADTGNSIVVIEHNLDVIKSCDY
IIDLGPEGGDNGGTIVATGTPKEVSKVEKSYTGQFLKKYFE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaaatagtcataagaggtgctaaagaaaacaatttaaaaaatgtagattta
gtcatccctagaaataaatttatagtattcacaggactatcaggttcaggaaaatcttca
ttagcatttgatacaatctatgctgaagggcagagacgatatgtagaaagtctttcatct
tatgctagacaatttttaggtcaaatggagaaacctaatgtggaatacatagaaggtctt
tcacctgctatatcgatagaccaaaagacaacttcgagaaatccaaggtctacagtagga
acagtaacagagatatacgactatttgagacttttatttgcaagagtgggagatgtatat
tgtcctgtttgtggaaataaaataagtcagatgactgtccaagagattgtagataaaata
ttagaattaccagaaagaacaaagttacaaatactgtctcctatcgttaggggtcaaaaa
ggaacgcataaaaaaacccttgaaggattaaaaaaagaaggatttgtaagagttagggta
aatggagaaaattacgaagttacagatgaaattgaactaagtaagaataaaaaacataac
atagaagttgttgtagatagaatagtggtgaaagatggtatcgaaggaagactttctgat
tctatagaaacagcaattaaattatctgatggattagttattgcccaaattatagatgga
gaagaaatactgtattcaactaaatttgcatgtcctgatcatggaataggaatagaagaa
ttatcaccaagaatgttctcatttaatgctccttttggtgcatgtgatgaatgtaatgga
ttaggagaacgtagaaatgtagatgaagatttagttataccaaataaagatttatctata
aatcaaggtgcaattgcagcgtggggttctgttagcaagagtaatgacacttactatagc
aaaatggtaagaagcctagctgaaatatatggtgtatcactagatactccatttaaagat
ttaccagaagactttgtagatgagttactttacggaagaaacaatacaatagtagaattt
gaatttgattcaaaattcggaggaagaagagaatatagagcgccttttgagggtgtactt
gttaacttagaaagaagatataacgaaacttcttctgaatatgcaaaggataaaatcgat
gaatttatggcggagactccttgtccaaaatgtaaaggtcatagattgaaaaaggaggtt
ttatcagttaaagtcggtggaaaaaatataatagaagtaacagaactttctataaatgaa
ttaatcgattttataaataatttagagttaagcgaaaaaaatcaatttattgctcaggaa
atattaaaagaaatacgtgaaagagcaactttcttacgaaacgtaggtcttgaatattta
aacttagcaagaaaagctggaactctatctggtggagaggcacaacgtataagattagca
actcaaataggttctgctttagtcggtgtactttatgtacttgatgaaccaagtattgga
cttcaccaaagagataatgataagttaatagcatcattacaaaacttaacgaaaatagga
aatacattgatagttgttgaacatgatgaagatactatgagagcagcagattatatcgta
gatataggtcctggggcaggagtgcacggtggtgaaatagttgctcaaggtacatttgag
gaaataatccaaaatccaaattctataacaggtatgtatctaagtggaaagaaaactata
gatgtaccagaaacaattagagaaggaaatggagaatttatagaaatagtaaaagctagt
gaaaataaccttaaaaatttaaatgtaaaaatacctttaggaaaattcgtatgtataact
ggggtttctggttcaggaaaaagtacacttataaatgaaatattatacaaaagtgttgct
aacaaagtaaatagatctagaatgaaaccaggaaagcataaagaaataaaaggtatagaa
aatatagataaaataataaatatagaccaaagtcctataggtagaactcctagatcaaat
ccagcaacatatacaggaatattcgatcatataagagatttatttgctatgactaatgaa
gcaaaggctagaggatataaaaaaggaagattcagtttcaatgtaaaaggtggaaggtgc
gaggcttgtaaaggtgatggaataatcaagatagaaatgcacttcctaccagatgtatac
gttccttgtgaagtatgtaaaggggaaagatacaacagagaaactcttcaggttaaatat
aaagataaaacaatttctgatgtattagatatgaatgtagaagaagcattagaattcttt
gaaaatataccaacaataaaaagaaaattagagacacttatggatgttgggctttcatat
ataaaactaggtcaaccatcaactcaattatcaggcggtgaagcacaaagaattaaatta
gctactgaattgagtaaaagacctactggaaagacattatatattttagatgaacctaca
acaggtttacacatggcagatgtagacaaattaatagatgttttacaaagattagctgat
acaggcaattctatcgtagtaatagagcataatctagatgttatcaagagttgcgattat
ataattgatttaggaccagaaggtggagacaatggaggaactattgttgcaacaggaacg
ccaaaagaagtttcaaaagtagaaaaatcttatactggacaattcttgaagaaatatttt
gaataa
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